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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Inagaki, E."

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Search Summary

This query matches 50 Structures.

Refinements

Structure Determination Methodology

experimental (50)

Scientific Name of Source Organism

	Thermus thermophilus HB8 (35)
	Pyrococcus horikoshii (5)
	Thermus thermophilus (5)
	Pyrococcus horikoshii OT3 (3)
	Homo sapiens (1)
	Phytolacca americana (1)

Taxonomy

	Bacteria (40)
	Archaea (8)
	Eukaryota (2)

Experimental Method

X-RAY DIFFRACTION (50)

Polymer Entity Type

Protein (50)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (8)
	1.5 - 2.0 (24)
	2.0 - 2.5 (13)
	2.5 - 3.0 (2)
	3.0 - 3.5 (2)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (1)
	2000 - 2004 (22)
	2005 - 2009 (26)

Enzyme Classification Name

	Oxidoreductases (16)
	Transferases (13)
	Isomerases (4)
	Hydrolases (2)
	Lyases (2)

Symmetry Type

	Dihedral (26)
	Cyclic (23)
	Asymmetric (8)
	Tetrahedral (4)

SCOP Classification

	Alpha and beta proteins (a/b) (29)
	Alpha and beta proteins (a+b) (17)
	All alpha proteins (5)
	All beta proteins (2)
	Multi-domain proteins (alpha and beta) (1)

AllSelected

1 to 25 of 50 Structures

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1APA \| pdb_00001apa	Download File View File

X-RAY STRUCTURE OF A POKEWEED ANTIVIRAL PROTEIN, CODED BY A NEW GENOMIC CLONE, AT 0.23 NM RESOLUTION. A MODEL STRUCTURE PROVIDES A SUITABLE ELECTROSTATIC FIELD FOR SUBSTRATE BINDING.

Ago, H., Kataoka, J., Tsuge, H., Habuka, N., Inagaki, E., Noma, M., Miyano, M.

(1994) Eur J Biochem 225: 369-374

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Phytolacca americana
Macromolecule	POKEWEED ANTIVIRAL PROTEIN (protein)

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1HAK \| pdb_00001hak	Download File View File

CRYSTAL STRUCTURE OF RECOMBINANT HUMAN PLACENTAL ANNEXIN V COMPLEXED WITH K-201 AS A CALCIUM CHANNEL ACTIVITY INHIBITOR

Ago, H., Inagaki, E., Miyano, M.

(1997) J Mol Biology 274: 16-20

Released	1999-02-16
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	ANNEXIN V (protein)
Unique Ligands	K21

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1OD6 \| pdb_00001od6	Download File View File

The Crystal Structure of Phosphopantetheine adenylyltransferase from Thermus Thermophilus in complex with 4'-phosphopantetheine

Takahashi, H., Inagaki, E., Miyano, M., Tahirov, T.H.

(2004) Acta Crystallogr D Biol Crystallogr 60: 97

Released	2003-03-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Thermus thermophilus HB8
Macromolecule	PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE (protein)
Unique Ligands	PNS, SO4

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1ODE \| pdb_00001ode	Download File View File

Crystal Analysis Of Chorismate Mutase From Thermus Thermophilus.

Inagaki, E., Miyano, M., Tahirov, T.H.

To be published

Released	2003-02-27
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Thermus thermophilus HB8
Macromolecule	CHORISMATE MUTASE (protein)

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1ODI \| pdb_00001odi	Download File View File

Purine nucleoside phosphorylase from Thermus Thermophilus

Tahirov, T.H., Inagaki, E., Miyano, M.

(2004) J Mol Biology 337: 1149

Released	2003-02-27
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Thermus thermophilus HB8
Macromolecule	PURINE NUCLEOSIDE PHOSPHORYLASE (protein)
Unique Ligands	ADN, SO4

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1ODJ \| pdb_00001odj	Download File View File

PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS

Tahirov, T.H., Inagaki, E., Miyano, M.

(2004) J Mol Biology 337: 1149

Released	2003-03-04
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Thermus thermophilus HB8
Macromolecule	PURINE NUCLEOSIDE PHOSPHORYLASE (protein)
Unique Ligands	GMP, SO4

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1ODK \| pdb_00001odk	Download File View File

PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS

Tahirov, T.H., Inagaki, E., Miyano, M.

(2004) J Mol Biology 337: 1149

Released	2003-02-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermus thermophilus HB8
Macromolecule	PURINE NUCLEOSIDE PHOSPHORYLASE (protein)
Unique Ligands	GOL

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1ODL \| pdb_00001odl	Download File View File

PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS

Tahirov, T.H., Inagaki, E., Miyano, M.

(2004) J Mol Biology 337: 1149

Released	2003-02-27
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermus thermophilus HB8
Macromolecule	PURINE NUCLEOSIDE PHOSPHORYLASE (protein)
Unique Ligands	CL, GOL, SO4

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1UB7 \| pdb_00001ub7	Download File View File

The Crystal Analysis of Beta-Keroacyl-[Acyl Carrier Protein] Synthase III (FABH)From Thermus Thermophilus.

Inagaki, E., Miyano, M., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2003-04-15
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermus thermophilus HB8
Macromolecule	3-oxoacyl-[acyl-carrier protein] synthase (protein)
Unique Ligands	GOL

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1UFY \| pdb_00001ufy	Download File View File

Crystal analysis of chorismate mutase from thermus thermophilus

Inagaki, E., Miyano, M., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2003-07-01
Method	X-RAY DIFFRACTION 0.96 Å
Organisms	Thermus thermophilus HB8
Macromolecule	Chorismate mutase (protein)
Unique Ligands	CL, MES, MLI

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1UI9 \| pdb_00001ui9	Download File View File

Crystal analysis of chorismate mutase from thermus thermophilus

Inagaki, E., Kuramitsu, S., Yokoyama, S., Miyano, M., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2003-07-29
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Thermus thermophilus
Macromolecule	chorismate mutase (protein)
Unique Ligands	GOL, MES

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1US4 \| pdb_00001us4	Download File View File

PUTATIVE GLUR0 LIGAND BINDING CORE WITH L-GLUTAMATE

Tahirov, T.H., Inagaki, E., Takahashi, H.

(2004) Acta Crystallogr D Biol Crystallogr 60: 1846

Released	2003-11-19
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Thermus thermophilus HB8
Macromolecule	PUTATIVE GLUR0 LIGAND BINDING CORE (protein)
Unique Ligands	EDO, GLU

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1US5 \| pdb_00001us5	Download File View File

PUTATIVE GLUR0 LIGAND BINDING CORE WITH L-GLUTAMATE

Tahirov, T.H., Inagaki, E.

(2004) Acta Crystallogr D Biol Crystallogr 60: 1846

Released	2003-11-19
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Thermus thermophilus HB8
Macromolecule	PUTATIVE GLUR0 LIGAND BINDING CORE (protein)
Unique Ligands	EDO, GLU

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1USC \| pdb_00001usc	Download File View File

PUTATIVE STYRENE MONOOXYGENASE SMALL COMPONENT

Tahirov, T.H., Inagaki, E., Takahashi, H.

To be published

Released	2003-11-27
Method	X-RAY DIFFRACTION 1.24 Å
Organisms	Thermus thermophilus HB8
Macromolecule	PUTATIVE STYRENE MONOOXYGENASE SMALL COMPONENT (protein)
Unique Ligands	ACT, FMN

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1USF \| pdb_00001usf	Download File View File

PUTATIVE STYRENE MONOOXYGENASE SMALL COMPONENT WITH BOUND NADP+

Tahirov, T.H., Inagaki, E., Takahashi, H.

To be published

Released	2003-11-25
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Thermus thermophilus HB8
Macromolecule	PUTATIVE STYRENE MONOOXYGENASE SMALL COMPONENT (protein)
Unique Ligands	FMN, GOL, NAP

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1USM \| pdb_00001usm	Download File View File

DCOH, A BIFUNCTIONAL PROTEIN-BINDING TRANSCRIPTIONAL COACTIVATOR, PRO9LEU MUTANT

Tahirov, T.H., Inagaki, E.

To be published

Released	2003-11-27
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Thermus thermophilus HB8
Macromolecule	HEPATOCYTE NUCLEAR FACTOR 1-ALPHA (protein)

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1USO \| pdb_00001uso	Download File View File

DCOH, A BIFUNCTIONAL PROTEIN-BINDING TRANSCRIPTIONAL COACTIVATOR, PRO9LEU MUTANT

Tahirov, T.H., Inagaki, E.

To be published

Released	2003-12-18
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Thermus thermophilus HB8
Macromolecule	HEPATOCYTE NUCLEAR FACTOR 1-ALPHA (protein)
Unique Ligands	SO4

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1UZB \| pdb_00001uzb	Download File View File

1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE

Tahirov, T.H., Inagaki, E.

(2006) J Mol Biology 362: 490

Released	2004-03-11
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Thermus thermophilus HB8
Macromolecule	1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE (protein)
Unique Ligands	MRD

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1V19 \| pdb_00001v19	Download File View File

2-KETO-3-DEOXYGLUCONATE KINASE FROM THERMUS THERMOPHILUS

Tahirov, T.H., Inagaki, E.

(2004) J Mol Biology 340: 477

Released	2004-04-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermus thermophilus HB8
Macromolecule	2-KETO-3-DEOXYGLUCONATE KINASE (protein)
Unique Ligands	DIO

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1V1A \| pdb_00001v1a	Download File View File

2-KETO-3-DEOXYGLUCONATE KINASE FROM THERMUS THERMOPHILUS WITH BOUND 2-KETO-3-DEOXYGLUCONATE AND ADP

Tahirov, T.H., Inagaki, E.

(2004) J Mol Biology 340: 477-489

Released	2004-04-14
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermus thermophilus HB8
Macromolecule	2-KETO-3-DEOXYGLUCONATE KINASE (protein)
Unique Ligands	ADP, KDG

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1V1B \| pdb_00001v1b	Download File View File

2-KETO-3-DEOXYGLUCONATE KINASE FROM THERMUS THERMOPHILUS WITH BOUND ATP

Tahirov, T.H., Inagaki, E.

(2004) J Mol Biology 340: 477-489

Released	2004-04-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Thermus thermophilus HB8
Macromolecule	2-KETO-3-DEOXYGLUCONATE KINASE (protein)
Unique Ligands	ATP

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1V1S \| pdb_00001v1s	Download File View File

2-KETO-3-DEOXYGLUCONATE KINASE FROM THERMUS THERMOPHILUS (CRYSTAL FORM 2)

Tahirov, T.H., Inagaki, E.

(2004) J Mol Biology 340: 477-489

Released	2004-04-26
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Thermus thermophilus HB8
Macromolecule	2-KETO-3-DEOXYGLUCONATE KINASE (protein)

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1V9C \| pdb_00001v9c	Download File View File

Crystal Analysis of Precorrin-8x Methyl Mutase from Thermus Thermophilus

Inagaki, E., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2004-02-10
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Thermus thermophilus
Macromolecule	Precorrin-8x Methyl Mutase (protein)
Unique Ligands	CL, SO4

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1VCT \| pdb_00001vct	Download File View File

Crystal structure of putative potassium channel related protein from Pyrococcus horikoshii

Inagaki, E., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2005-03-22
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Pyrococcus horikoshii
Macromolecule	hypothetical protein PH0236 (protein)
Unique Ligands	CL, EDO, NA