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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Thomas, P.V."

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Homo sapiens (10)
	Human immunodeficiency virus 1 (3)
	Influenza A virus (A/Hong Kong/1/1968(H3N2)) (3)
	Influenza A virus (A/California/04/2009(H1N1)) (1)
	Influenza A virus (A/Hong Kong/1-4-MA21-1/1968(H3N2)) (1)

Taxonomy

	Eukaryota (10)
	Riboviria (8)

Experimental Method

	X-RAY DIFFRACTION (9)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.5 - 3.0 (3)
	3.0 - 3.5 (4)
	3.5 - 4.0 (1)
	4.0 - 4.5 (1)

Release Date

2015 - 2019 (10)

Enzyme Classification Name

Hydrolases (1)

Symmetry Type

	Cyclic (8)
	Asymmetric (2)

SCOP Classification

	All beta proteins (7)
	Coiled coil proteins (3)
	Artifacts (2)

AllSelected

1 to 10 of 10 Structures

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5FYJ	Download File View File

Crystal Structure at 3.4 A Resolution of Fully Glycosylated HIV-1 Clade G X1193.c1 SOSIP.664 Prefusion Env Trimer in Complex with Broadly Neutralizing Antibodies PGT122, 35O22 and VRC01

Stewart-Jones, G.B.E., Zhou, T., Thomas, P.V., Kwong, P.D.

(2016) Cell 165: 813

Released	2016-04-27
Method	X-RAY DIFFRACTION 3.11 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Unique protein chains: 7
Unique Ligands	CIT, EDO, NAG
Unique branched monosaccharides	BMA, MAN, NAG

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5FYK	Download File View File

Crystal Structure at 3.7 A Resolution of Fully Glycosylated HIV-1 Clade B JR-FL SOSIP.664 Prefusion Env Trimer in Complex with Broadly Neutralizing Antibodies PGT122, 35O22 and VRC01

Stewart-Jones, G.B.E., Zhou, T., Thomas, P.V., Kwong, P.D.

(2016) Cell 165: 813

Released	2016-04-27
Method	X-RAY DIFFRACTION 3.107 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Unique protein chains: 7
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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5FYL	Download File View File

Crystal Structure at 3.7 A Resolution of Fully Glycosylated HIV-1 Clade A BG505 SOSIP.664 Prefusion Env Trimer in Complex with Broadly Neutralizing Antibodies PGT122 and 35O22

Stewart-Jones, G.B.E., Zhou, T., Thomas, P.V., Kwong, P.D.

(2016) Cell 165: 813

Released	2016-04-27
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Unique protein chains: 6
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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5K9J	Download File View File

Crystal structure of multidonor HV6-1-class broadly neutralizing Influenza A antibody 56.a.09 isolated following H5 immunization.

Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D.

(2016) Cell 166: 609-623

Released	2016-07-27
Method	X-RAY DIFFRACTION 1.904 Å
Organisms	Homo sapiens
Macromolecule	56.a.09 heavy chain (protein) 56.a.09 light chain (protein)
Unique Ligands	15P

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5K9K	Download File View File

Crystal structure of multidonor HV6-1-class broadly neutralizing Influenza A antibody 56.a.09 in complex with Hemagglutinin Hong Kong 1968.

Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D.

(2016) Cell 166: 609-623

Released	2016-12-21
Method	X-RAY DIFFRACTION 2.97 Å
Organisms	Homo sapiens Influenza A virus (A/Hong Kong/1/1968(H3N2))
Macromolecule	56.a.09 Heavy chain (protein) 56.a.09 Light chain (protein) Hemagglutinin (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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5K9O	Download File View File

Crystal structure of multidonor HV1-18+HD3-9 class broadly neutralizing Influenza A antibody 31.b.09 in complex with Hemagglutinin H1 A/California/04/2009

Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D.

(2016) Cell 166: 609-623

Released	2016-12-28
Method	X-RAY DIFFRACTION 3.387 Å
Organisms	Homo sapiens Influenza A virus (A/California/04/2009(H1N1))
Macromolecule	31.b.09 Heavy Fv (protein) 31.b.09 Light Fv (protein) Hemagglutinin (protein)
Unique branched monosaccharides	BMA, NAG

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5K9Q	Download File View File

Crystal structure of multidonor HV1-18-class broadly neutralizing Influenza A antibody 16.a.26 in complex with A/Hong Kong/1-4-MA21-1/1968 (H3N2) Hemagglutinin

Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D.

(2016) Cell 166: 609-623

Released	2016-11-30
Method	X-RAY DIFFRACTION 2.503 Å
Organisms	Homo sapiens Influenza A virus (A/Hong Kong/1/1968(H3N2))
Macromolecule	16.a.26 Heavy chain (protein) 16.a.26 Light chain (protein) Hemagglutinin HA1 (protein) Hemagglutinin HA2 (protein)
Unique Ligands	NAG

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5KAN	Download File View File

Crystal structure of multidonor HV1-18-class broadly neutralizing Influenza A antibody 16.g.07 in complex with A/Hong Kong/1-4-MA21-1/1968 (H3N2) Hemagglutinin

Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D.

(2016) Cell 166: 609-623

Released	2016-11-30
Method	X-RAY DIFFRACTION 2.785 Å
Organisms	Homo sapiens Influenza A virus (A/Hong Kong/1/1968(H3N2))
Macromolecule	16.g.07 Heavy chain (protein) 16.g.07 Light chain (protein) Hemagglutinin HA1 (protein) Hemagglutinin HA2 (protein)
Unique Ligands	NAG

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5KAQ	Download File View File

Crystal structure of broadly neutralizing Influenza A antibody 31.a.83 in complex with Hemagglutinin Hong Kong 1968.

Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D.

(2016) Cell 166: 609-623

Released	2017-02-22
Method	X-RAY DIFFRACTION 3.514 Å
Organisms	Homo sapiens Influenza A virus (A/Hong Kong/1-4-MA21-1/1968(H3N2))
Macromolecule	ANTIBODY 31.A.83 FAB HEAVY CHAIN (protein) ANTIBODY 31.A.83 FAB LIGHT CHAIN (protein) Hemagglutinin (protein)
Unique Ligands	NAG

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5WP9	Download File View File

Structural Basis of Mitochondrial Receptor Binding and Constriction by Dynamin-Related Protein 1

Kalia, R., Wang, R.Y.R., Yusuf, A., Thomas, P.V., Agard, D.A., Shaw, J.M., Frost, A.

(2018) Nature 558: 401-405

Released	2018-06-20
Method	ELECTRON MICROSCOPY 4.22 Å
Organisms	Homo sapiens
Macromolecule	Dynamin-1-like protein (protein) Mitochondrial dynamics protein MID49 (protein)
Unique Ligands	GCP, MG

1 to 10 of 10 Structures

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Structure Determination Methodology

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Taxonomy

Experimental Method

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