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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Tsai, M.D."

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Search Summary

This query matches 98 Structures.

Refinements

Structure Determination Methodology

experimental (98)

Scientific Name of Source Organism

	Homo sapiens (44)
	synthetic construct (25)
	Saccharolobus solfataricus (12)
	Methanosarcina mazei (11)
	Bacillus subtilis (7)
	Bos taurus (7)
	Saccharolobus solfataricus P2 (5)
	Thermococcus sp. 9oN-7 (5)
	Mus musculus (3)
	Actinoplanes teichomyceticus (2)

More...

Taxonomy

	Eukaryota (55)
	Archaea (34)
	other sequences (25)
	Bacteria (9)

Experimental Method

	X-RAY DIFFRACTION (68)
	ELECTRON MICROSCOPY (26)
	SOLUTION NMR (4)

Polymer Entity Type

	Protein (98)
	DNA (26)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (33)
	2.0 - 2.5 (13)
	2.5 - 3.0 (26)
	3.0 - 3.5 (20)

Release Date

	2000 - 2004 (6)
	2005 - 2009 (5)
	2010 - 2014 (4)
	2015 - 2019 (48)
	2020 - 2024 (35)

Enzyme Classification Name

	Transferases (41)
	Oxidoreductases (18)
	Lyases (12)
	Ligases (11)
	Hydrolases (7)

Membrane Protein Annotation

PDBTM (5)

Symmetry Type

	Asymmetric (55)
	Tetrahedral (17)
	Cyclic (16)
	Dihedral (6)
	Helical (5)

SCOP Classification

	All alpha proteins (20)
	Alpha and beta proteins (a+b) (13)
	All beta proteins (2)
	Alpha and beta proteins (a/b) (1)
	Low resolution protein structures (1)

AllSelected

1 to 25 of 98 Structures

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1C74	Download File View File

Structure of the double mutant (K53,56M) of phospholipase A2

Sekar, K., Tsai, M.D., Jain, M.K., Ramakumar, S.

(2000) Biochemistry 39: 12312-12323

Released	2000-07-22
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bos taurus
Macromolecule	PHOSPHOLIPASE A2 (protein)
Unique Ligands	CA

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1D9S	Download File View File

TUMOR SUPPRESSOR P15(INK4B) STRUCTURE BY COMPARATIVE MODELING AND NMR DATA

Yuan, C., Ji, L., Selby, T.L., Byeon, I.J.L., Tsai, M.D.

(1999) J Mol Biol 294: 201-211

Released	2000-07-28
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	CYCLIN-DEPENDENT KINASE 4 INHIBITOR B (protein)

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1GH4	Download File View File

Structure of the triple mutant (K56M, K120M, K121M) of phospholipase A2

Sekar, K., Velmurugan, D., Tsai, M.D.

(2002) J Mol Biol 324: 755-762

Released	2001-05-09
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bos taurus
Macromolecule	PHOSPHOLIPASE A2 (protein)
Unique Ligands	CA, MPD

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1O2E	Download File View File

Structure of the triple mutant (K53,56,120M) + Anisic acid complex of phospholipase A2

Sekar, K., Velmurugan, D., Tsai, M.D.

(2003) J Mol Biol 333: 367-376

Released	2003-09-09
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bos taurus
Macromolecule	Phospholipase A2 (protein)
Unique Ligands	ANN, CA

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1R21	Download File View File

Solution Structure of human Ki67 FHA Domain

Byeon, I.J., Li, H., Tsai, M.D.

(2004) J Mol Biol 335: 371-381

Released	2003-12-30
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Antigen Ki-67 (protein)

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1TR4	Download File View File

Solution structure of human oncogenic protein gankyrin

Yuan, C., Li, J., Mahajan, A., Poi, M.J., Byeon, I.J., Tsai, M.D.

(2004) Biochemistry 43: 12152-12161

Released	2004-11-16
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	26S proteasome non-ATPase regulatory subunit 10 (protein)

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2AFF	Download File View File

The solution structure of the Ki67FHA/hNIFK(226-269)3P complex

Byeon, I.-J.L., Li, H., Song, H., Gronenborn, A.M., Tsai, M.D.

(2005) Nat Struct Mol Biol 12: 987-993

Released	2005-10-25
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Antigen KI-67 (protein) MKI67 FHA domain interacting nucleolar phosphoprotein (protein)

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2B96	Download File View File

Third Calcium ion found in an inhibitor bound phospholipase A2

Sekar, K., Velmurugan, D., Yamane, T., Tsai, M.D.

(2006) Acta Crystallogr D Biol Crystallogr 62: 392-397

Released	2006-03-28
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Bos taurus
Macromolecule	Phospholipase A2 (protein)
Unique Ligands	ANN, CA, CL, TRS

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2BAX	Download File View File

Atomic Resolution Structure of the Double Mutant (K53,56M) of Bovine Pancreatic Phospholipase A2

Sekar, K., Yogavel, M., Velmurugan, D., Dauter, Z., Dauter, M., Tsai, M.D.

(2005) Acta Crystallogr Sect F Struct Biol Cryst Commun 61: 3-7

Released	2005-10-25
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Bos taurus
Macromolecule	Phospholipase A2 (protein)
Unique Ligands	CA, CL, MPD, MRD

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2BCH	Download File View File

A possible of Second calcium ion in interfacial binding: Atomic and Medium resolution crystal structures of the quadruple mutant of phospholipase A2

Sekar, K., Yogavel, M., Velmurugan, D., Poi, M.J., Dauter, Z., Tsai, M.D.

(2006) Acta Crystallogr D Biol Crystallogr 62: 717-724

Released	2006-07-04
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Bos taurus
Macromolecule	Phospholipase A2 (protein)
Unique Ligands	CA, CL, MPD

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2BD1	Download File View File

A possible role of the second calcium ion in interfacial binding: Atomic and medium resolution crystal structures of the quadruple mutant of phospholipase A2

Sekar, K., Velmurugan, D., Tsai, M.D.

(2006) Acta Crystallogr D Biol Crystallogr 62: 717-724

Released	2006-07-04
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bos taurus
Macromolecule	Phospholipase A2 (protein)
Unique Ligands	CA, MPD

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2X9L	Download File View File

Crystal structure of deacetylase-bog complex in biosynthesis pathway of teicoplanin.

Chan, H.C., Huang, Y.T., Lyu, S.Y., Huang, C.J., Li, Y.S., Liu, Y.C., Chou, C.C., Tsai, M.D., Li, T.L.

(2011) Mol Biosyst 7: 1224

Released	2011-02-09
Method	X-RAY DIFFRACTION 1.732 Å
Organisms	Actinoplanes teichomyceticus
Macromolecule	N-ACYL GLM PEUDO-TEICOPLANIN DEACETYLASE (protein)
Unique Ligands	BOG, ZN

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2XAD	Download File View File

Crystal structure of deacetylase-teicoplanin complex in biosynthesis pathway of teicoplanin

Chan, H.C., Huang, Y.T., Lyu, S.Y., Huang, C.J., Li, Y.S., Liu, Y.C., Chou, C.C., Tsai, M.D., Li, T.L.

(2011) Mol Biosyst 7: 1224

Released	2011-03-02
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Actinoplanes teichomyceticus Nonomuraea gerenzanensis
Macromolecule	N-ACYL GLM PEUDO-TEICOPLANIN DEACETYLASE (protein) TEICOPLANIN (protein)
Unique Ligands	BMA, GCS, NAG, T55

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3VA1	Download File View File

Crystal structure of the mammalian MDC1 FHA domain

Wu, H.H., Wu, P.Y., Huang, K.F., Kao, Y.Y., Tsai, M.D.

(2012) Biochemistry

Released	2012-02-01
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Mus musculus
Macromolecule	Mediator of DNA damage checkpoint protein 1 (protein)
Unique Ligands	SO4

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3VA4	Download File View File

Crystal structure of the mammalian MDC1 FHA domain complexed with CHK2 pThr68 peptide

Wu, H.H., Wu, P.Y., Huang, K.F., Kao, Y.Y., Tsai, M.D.

(2012) Biochemistry

Released	2012-02-01
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Mediator of DNA damage checkpoint protein 1 (protein) Serine/threonine-protein kinase Chk2 (protein)

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4XQ8	Download File View File

Human DNA polymerase lambda- MgdATP binary complex and complex with 6 paired DNA

Tsai, M.D., Liu, M.S.

(2016) J Am Chem Soc 138: 2389-2398

Released	2016-02-24
Method	X-RAY DIFFRACTION 2.798 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase lambda (protein) DNA (5'-D(CPAPGPTPAPC)-3') (nucleic acid) DNA (5'-D(PGPTPAPCPTPG)-3') (nucleic acid)
Unique Ligands	DTP, MG

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4XRH	Download File View File

Human DNA polymerase lambda- MgdTTP binary and complex with 6 paired DNA

Liu, M.S., Tsai, M.D.

(2016) J Am Chem Soc 138: 2389-2398

Released	2016-02-24
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase lambda (protein) DNA (5'-D(CPAPGPTPAPC)-3') (nucleic acid) DNA (5'-D(PGPTPAPCPTPG)-3') (nucleic acid)
Unique Ligands	MG, TTP

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4YM4	Download File View File

Truncated Human TIFA in complex with its Thr9 phosphorylated N-terminal peptide 1-15

Weng, J.H., Wei, T.Y.W., Hsieh, Y.C., Huang, C.C.F., Wu, P.Y.G., Chen, E.S.W., Huang, K.F., Chen, C.J., Tsai, M.D.

(2015) Biochemistry 54: 6219-6229

Released	2015-10-21
Method	X-RAY DIFFRACTION 3.12 Å
Organisms	Homo sapiens
Macromolecule	TRAF-interacting protein with FHA domain-containing protein A (protein)

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4ZGI	Download File View File

Structure of Truncated Human TIFA

Weng, J.H., Wei, T.Y.W., Hsieh, Y.C., Huang, C.C.F., Wu, P.Y.G., Chen, E.S.W., Huang, K.F., Chen, C.J., Tsai, M.D.

(2015) Biochemistry 54: 6219-6229

Released	2015-10-14
Method	X-RAY DIFFRACTION 2.701 Å
Organisms	Homo sapiens
Macromolecule	TRAF-interacting protein with FHA domain-containing protein A (protein)

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5CA7	Download File View File

Human DNA polymerase lambda- MgdGTP binary and complex with 6 paired DNA

Liu, M.S., Tsai, M.D.

(2016) J Am Chem Soc 138: 2389-2398

Released	2016-02-24
Method	X-RAY DIFFRACTION 2.522 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase lambda (protein) DNA (5'-D(CPAPGPTPAPC)-3') (nucleic acid) DNA (5'-D(PGPTPAPCPTPG)-3') (nucleic acid)
Unique Ligands	DGT, MG, SO4

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5CB1	Download File View File

Apo enzyme of human Polymerase lambda

Liu, M.S., Tsai, M.D.

(2016) J Am Chem Soc 138: 2389-2398

Released	2016-02-24
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase lambda (protein)

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5CHG	Download File View File

Human DNA polymerase lambda L431A mutant- MgdGTP binary and complex with 6 paired DNA

Liu, M.S., Tsai, M.D.

(2016) J Am Chem Soc 138: 2389-2398

Released	2016-02-24
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase lambda (protein) DNA (5'-D(CPAPGPTPAPC)-3') (nucleic acid) DNA (5'-D(PGPTPAPCPTPG)-3') (nucleic acid)
Unique Ligands	DGT, MG, SO4

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5CJ7	Download File View File

Human DNA polymerase lambda L431A mutant- MgdTTP binary and complex with 6 paired DNA

Liu, M.S., Tsai, M.D.

(2016) J Am Chem Soc 138: 2389-2398

Released	2016-02-24
Method	X-RAY DIFFRACTION 2.901 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase lambda (protein) DNA (5'-D(CPAPGPTPAPC)-3') (nucleic acid) DNA (5'-D(PGPTPAPCPTPG)-3') (nucleic acid)
Unique Ligands	MG, TTP

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5CP2	Download File View File

Human DNA polymerase lambda L431A mutant- Apoenzyme and complex with 6 paired DNA

Liu, M.S., Tsai, M.D.

(2016) J Am Chem Soc 138: 2389-2398

Released	2016-02-24
Method	X-RAY DIFFRACTION 2.36 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase lambda (protein) DNA (5'-D(CPAPGPTPAPC)-3') (nucleic acid) DNA (5'-D(PGPTPAPCPTPG)-3') (nucleic acid)
Unique Ligands	SO4

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5CR0	Download File View File

Human DNA polymerase lambda L431A mutant- MgdCTP binary and complex with 6 paired DNA

Liu, M.S., Tsai, M.D.

(2016) J Am Chem Soc 138: 2389-2398

Released	2016-02-24
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase lambda (protein) DNA (5'-D(CPAPGPTPAPC)-3') (nucleic acid) DNA (5'-D(PGPTPAPCPTPG)-3') (nucleic acid)
Unique Ligands	DCP, MG

1 to 25 of 98 Structures

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