RCSB PDB: Search

2DW6 \| pdb_00002dw6	Download File View File

Crystal structure of the mutant K184A of D-Tartrate Dehydratase from Bradyrhizobium japonicum complexed with Mg++ and D-tartrate

Fedorov, A.A., Fedorov, E.V., Yew, W.S., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2006) Biochemistry 45: 14598-14608

Released	2006-12-19
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bradyrhizobium japonicum
Macromolecule	Bll6730 protein (protein)
Unique Ligands	MG, TAR, TLA

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2DW7 \| pdb_00002dw7	Download File View File

Crystal structure of D-tartrate dehydratase from Bradyrhizobium japonicum complexed with Mg++ and meso-tartrate

Fedorov, A.A., Fedorov, E.V., Yew, W.S., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2006) Biochemistry 45: 14598-14608

Released	2006-12-19
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bradyrhizobium japonicum
Macromolecule	Bll6730 protein (protein)
Unique Ligands	MG, SRT

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3GDK \| pdb_00003gdk	Download File View File

Crystal structure of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2009) Biochemistry 48: 5518-5531

Released	2009-06-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)

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3GDL \| pdb_00003gdl	Download File View File

Crystal structure of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae complexed with 6-azauridine 5'-monophosphate

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2009) Biochemistry 48: 5518-5531

Released	2009-06-23
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	UP6

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3GDM \| pdb_00003gdm	Download File View File

Crystal structure of the K93R mutant of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

To be published

Released	2010-02-09
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)

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3GDR \| pdb_00003gdr	Download File View File

Crystal structure of the D91N mutant of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2009) Biochemistry 48: 5518-5531

Released	2009-06-23
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)

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3GDT \| pdb_00003gdt	Download File View File

Crystal structure of the D91N mutant of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae complexed with 6-azauridine 5'-monophosphate

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2009) Biochemistry 48: 5518-5531

Released	2009-06-23
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	UP6

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3LHT \| pdb_00003lht	Download File View File

Crystal structure of the mutant V201F of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMQ

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3LHU \| pdb_00003lhu	Download File View File

Crystal structure of the mutant I199F of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMQ

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3LHV \| pdb_00003lhv	Download File View File

Crystal structure of the mutant V182A.I199A.V201A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMQ

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3LHW \| pdb_00003lhw	Download File View File

Crystal structure of the mutant V182A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMQ

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3LHY \| pdb_00003lhy	Download File View File

Crystal structure of the mutant I199A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMQ

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3LHZ \| pdb_00003lhz	Download File View File

Crystal structure of the mutant V201A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMQ

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3LI0 \| pdb_00003li0	Download File View File

Crystal structure of the mutant R203A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2012) Biochemistry 51: 8665-8678

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMQ

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3LI1 \| pdb_00003li1	Download File View File

Crystal structure of the mutant I218A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMQ

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3LLD \| pdb_00003lld	Download File View File

Crystal structure of the mutant S127G of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with 6-azauridine 5'-monophosphate

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	UP6

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3LLF \| pdb_00003llf	Download File View File

Crystal structure of the mutant S127P of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with 6-azauridine 5'-monophosphate

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	UP6

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3LTP \| pdb_00003ltp	Download File View File

Crystal structure of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMP

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3LTS \| pdb_00003lts	Download File View File

Crystal structure of the mutant V182A,I199A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.428 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMP

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3LTY \| pdb_00003lty	Download File View File

Crystal structure of the mutant V182A,I218A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMP

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3LV5 \| pdb_00003lv5	Download File View File

Crystal structure of the mutant I199E of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.444 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMP

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3LV6 \| pdb_00003lv6	Download File View File

Crystal structure of the mutant I218F of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.451 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMP

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3M1Z \| pdb_00003m1z	Download File View File

Crystal structure of the mutant V182A.V201A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.42 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	BMP

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3M41 \| pdb_00003m41	Download File View File

Crystal structure of the mutant V182A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	GOL

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3M43 \| pdb_00003m43	Download File View File

Crystal structure of the mutant I199A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum

Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.

(2010) Biochemistry 49: 3514-3516

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	GOL

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2DW6 | pdb_00002dw6

2DW7 | pdb_00002dw7

3GDK | pdb_00003gdk

3GDL | pdb_00003gdl

3GDM | pdb_00003gdm

3GDR | pdb_00003gdr

3GDT | pdb_00003gdt

3LHT | pdb_00003lht

3LHU | pdb_00003lhu

3LHV | pdb_00003lhv

3LHW | pdb_00003lhw

3LHY | pdb_00003lhy

3LHZ | pdb_00003lhz

3LI0 | pdb_00003li0

3LI1 | pdb_00003li1

3LLD | pdb_00003lld

3LLF | pdb_00003llf

3LTP | pdb_00003ltp

3LTS | pdb_00003lts

3LTY | pdb_00003lty

3LV5 | pdb_00003lv5

3LV6 | pdb_00003lv6

3M1Z | pdb_00003m1z

3M41 | pdb_00003m41

3M43 | pdb_00003m43