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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Yang, M.J."

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Search Summary

This query matches 61 Structures.

Refinements

Structure Determination Methodology

experimental (61)

Scientific Name of Source Organism

	Sus scrofa (57)
	Caldanaerobacter subterraneus subsp. tengcongensis MB4 (2)
	Staphylococcus aureus (2)
	Homo sapiens (1)

Taxonomy

	Eukaryota (58)
	Bacteria (4)

Experimental Method

	ELECTRON MICROSCOPY (57)
	X-RAY DIFFRACTION (4)

Polymer Entity Type

Protein (61)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	2.0 - 2.5 (4)
	2.5 - 3.0 (33)
	3.0 - 3.5 (21)
	3.5 - 4.0 (2)

Release Date

	2010 - 2014 (2)
	2015 - 2019 (2)
	2020 - 2024 (57)

Enzyme Classification Name

	Translocases (57)
	Oxidoreductases (1)

Membrane Protein Annotation

	PDBTM (49)
	OPM (17)
	mpstruc (12)
	MemProtMD (2)

Symmetry Type

Asymmetric (61)

SCOP Classification

	All beta proteins (1)
	Artifacts (1)

AllSelected

1 to 25 of 61 Structures

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Explore in 3D

4M58	Download File View File

Crystal Structure of an transition metal transporter

Yu, Y., Yan, C.Y., Zhang, B., Li, X.L., Gu, J.K.

(2014) Cell Res 24: 267-277

Released	2014-03-26
Method	X-RAY DIFFRACTION 3.21 Å
Organisms	Caldanaerobacter subterraneus subsp. tengcongensis MB4
Macromolecule	Cobalamin biosynthesis protein CbiM (protein)
Unique Ligands	NI

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4M5C	Download File View File

Crystal Structure of an Truncated Transition metal Transporter

Yu, Y., Zhou, M.Z., Gu, J.K.

(2014) Cell Res 24: 267-277

Released	2014-03-26
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Caldanaerobacter subterraneus subsp. tengcongensis MB4
Macromolecule	Cobalamin biosynthesis protein CbiM (protein)
Unique Ligands	CO, HEZ

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5CF3	Download File View File

Crystal structures of Bbp from Staphylococcus aureus

Yu, Y., Zhang, X.Y., Gu, J.K.

(2015) Protein Cell 6: 757-766

Released	2015-09-23
Method	X-RAY DIFFRACTION 2.031 Å
Organisms	Staphylococcus aureus
Macromolecule	Bone sialoprotein-binding protein (protein)
Unique Ligands	CA

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5CFA	Download File View File

Crystal structures of Bbp from Staphylococcus aureus with peptide ligand

Yu, Y., Zhang, X.Y., Gu, J.K.

(2015) Protein Cell 6: 757-766

Released	2015-09-23
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Homo sapiens Staphylococcus aureus
Macromolecule	Bone sialoprotein-binding protein (protein) Peptide from Fibrinogen alpha chain (protein)
Unique Ligands	MG

Explore in 3D

7V2C	Download File View File

Active state complex I from Q10 dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 44
Unique Ligands	8Q1, ADP, CDL, FES, FMN, MG, NDP, PEE, PLX, SF4, UQ, ZN

Explore in 3D

7V2D	Download File View File

Deactive state complex I from Q10 dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-03-02
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 44
Unique Ligands	8Q1, ADP, CDL, FES, FMN, MG, NDP, PEE, PLX, SF4, UQ, ZN

Explore in 3D

7V2E	Download File View File

Active state complex I from Q10-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 44
Unique Ligands	8Q1, ADP, CDL, FES, FMN, MG, NAI, NDP, PEE, PLX, SF4, UQ, ZN

Explore in 3D

7V2F	Download File View File

Deactive state complex I from Q10-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-03-02
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 44
Unique Ligands	8Q1, ADP, CDL, FES, FMN, MG, NAI, NDP, PEE, PLX, SF4, UQ, ZN

Explore in 3D

7V2H	Download File View File

Active state complex I from DQ-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.5 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 44
Unique Ligands	8Q1, ADP, CDL, DCQ, FES, FMN, MG, NAI, NDP, PEE, PLX, SF4, UQ, ZN

Explore in 3D

7V2K	Download File View File

Deactive state complex I from DQ-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.7 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 44
Unique Ligands	8Q1, ADP, CDL, FES, FMN, MG, NAI, NDP, PEE, PLX, SF4, UQ, ZN

Explore in 3D

7V2R	Download File View File

Active state complex I from Q1-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.6 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 44
Unique Ligands	8Q1, ADP, CDL, FES, FMN, MG, NAI, NDP, PEE, PLX, SF4, UQ, UQ1, ZN

Explore in 3D

7V30	Download File View File

Deactive state complex I from Q1-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.7 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 44
Unique Ligands	8Q1, ADP, CDL, FES, FMN, MG, NAI, NDP, PEE, PLX, SF4, UQ, ZN

Explore in 3D

7V31	Download File View File

Active state complex I from rotenone dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 44
Unique Ligands	8Q1, 970, ADP, CDL, FES, FMN, MG, NDP, PEE, PLX, SF4, UQ, ZN

Explore in 3D

7V32	Download File View File

Deactive state complex I from rotenone dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-03-02
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 44
Unique Ligands	8Q1, ADP, CDL, FES, FMN, MG, NDP, PEE, PLX, SF4, UQ, ZN

Explore in 3D

7V33	Download File View File

Active state complex I from rotenone-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.6 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 44
Unique Ligands	8Q1, 970, ADP, CDL, FES, FMN, MG, NAI, NDP, PEE, PLX, SF4, UQ, ZN

Explore in 3D

7V3M	Download File View File

Deactive state complex I from rotenone-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 44
Unique Ligands	8Q1, ADP, CDL, FES, FMN, MG, NAI, NDP, PEE, PLX, SF4, UQ, ZN

Explore in 3D

7VB7	Download File View File

Matrix arm of active state CI from DQ-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.4 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 18
Unique Ligands	8Q1, CDL, DCQ, FES, FMN, MG, NAI, NDP, PEE, PLX, SF4, UQ, ZN

Explore in 3D

7VBL	Download File View File

Membrane arm of active state CI from DQ-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.6 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 29
Unique Ligands	8Q1, ADP, CDL, PEE, PLX, UQ

Explore in 3D

7VBN	Download File View File

Matrix arm of deactive state CI from DQ-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.4 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 18
Unique Ligands	8Q1, CDL, FES, FMN, MG, NAI, NDP, PEE, PLX, SF4, ZN

Explore in 3D

7VBP	Download File View File

Membrane arm of deactive state CI from DQ-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 29
Unique Ligands	8Q1, ADP, CDL, PEE, PLX, UQ

Explore in 3D

7VBZ	Download File View File

Matrix arm of active state CI from Rotenone-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.4 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 18
Unique Ligands	8Q1, 970, CDL, FES, FMN, MG, NAI, NDP, PEE, PLX, SF4, UQ, ZN

Explore in 3D

7VC0	Download File View File

Membrane arm of active state CI from Rotenone-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.6 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 29
Unique Ligands	8Q1, ADP, CDL, PEE, PLX, UQ

Explore in 3D

7VWJ	Download File View File

Matrix arm of deactive state CI from rotenone-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.6 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 18
Unique Ligands	8Q1, CDL, FES, FMN, MG, NAI, NDP, PEE, PLX, SF4, ZN

Explore in 3D

7VWL	Download File View File

Membrane arm of deactive state CI from rotenone-NADH dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.7 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 29
Unique Ligands	8Q1, ADP, CDL, PEE, PLX, UQ

Explore in 3D

7VXP	Download File View File

Matrix arm of active state CI from Q10 dataset

Gu, J.K., Yang, M.J.

(2022) Nat Struct Mol Biol 29: 172-182

Released	2022-11-23
Method	ELECTRON MICROSCOPY 2.7 Å
Organisms	Sus scrofa
Macromolecule	Unique protein chains: 18
Unique Ligands	8Q1, CDL, FES, FMN, MG, NDP, PEE, PLX, SF4, UQ, ZN

1 to 25 of 61 Structures

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