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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "An, Q."

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Search Summary

This query matches 18 Structures.

Refinements

Structure Determination Methodology

experimental (18)

Scientific Name of Source Organism

	Candidatus Scalindua brodae (6)
	Escherichia coli (5)
	Homo sapiens (3)
	African swine fever virus LIS57 (2)
	Ligusticum chuanxiong (2)
	Saccharomyces cerevisiae (1)
	Saccharomyces cerevisiae S288C (1)

Taxonomy

	Bacteria (11)
	Eukaryota (5)
	Varidnaviria (2)

Experimental Method

	ELECTRON MICROSCOPY (13)
	X-RAY DIFFRACTION (5)

Polymer Entity Type

	Protein (18)
	RNA (6)
	DNA (3)
	NA-hybrid (1)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.5 - 3.0 (7)
	3.0 - 3.5 (7)
	3.5 - 4.0 (1)

Release Date

2020 - 2024 (18)

Enzyme Classification Name

	Hydrolases (2)
	Isomerases (2)

Symmetry Type

	Asymmetric (9)
	Cyclic (8)
	Helical (1)

SCOP Classification

	All beta proteins (3)
	Alpha and beta proteins (a/b) (2)

AllSelected

1 to 18 of 18 Structures

Page 1 of 1

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6LQ9	Download File View File

S109 in complex with CRM1-Ran-RanBP1

Sun, Q., Lei, Y.

(2021) J Med Chem 64: 6596-6607

Released	2021-06-23
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens Saccharomyces cerevisiae S288C
Macromolecule	Exportin-1 (protein) GTP-binding nuclear protein Ran (protein) Ran-specific GTPase-activating protein 1 (protein)
Unique Ligands	CL, EQF, GOL, GTP, MG, NO3

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6TXZ	Download File View File

FAB PART OF M6903 IN COMPLEX WITH HUMAN TIM3

Musil, D., Sood, V.

(2020) Oncoimmunology 9: 1744921-1744921

Released	2020-04-08
Method	X-RAY DIFFRACTION 3.06 Å
Organisms	Homo sapiens
Macromolecule	Fab H (protein) Fab L (protein) Hepatitis A virus cellular receptor 2 (protein)

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7CND	Download File View File

NCI-1 in complex with CRM1-Ran-RanBP1

Sun, Q., Lei, Y.

(2021) J Med Chem 64: 6596-6607

Released	2021-06-09
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens Saccharomyces cerevisiae
Macromolecule	CRM1 isoform 1 (protein) GTP-binding nuclear protein Ran (protein) YRB1 isoform 1 (protein)
Unique Ligands	CL, DMS, G6U, GOL, GTP, MG, MPO

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7V6J	Download File View File

LcCOMT in complex with SAM

Yu, Y., CHen, Q.

(2022) Int J Biol Macromol 194: 317-330

Released	2021-12-29
Method	X-RAY DIFFRACTION 1.799 Å
Organisms	Ligusticum chuanxiong
Macromolecule	LcCOMT (protein)
Unique Ligands	NA, SAM

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7V6L	Download File View File

LcCOMT in complex with SAH

Yu, Y., CHen, Q.

(2022) Int J Biol Macromol 194: 317-330

Released	2021-12-29
Method	X-RAY DIFFRACTION 1.948 Å
Organisms	Ligusticum chuanxiong
Macromolecule	LcCOMT (protein)
Unique Ligands	SAH

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7X7A	Download File View File

Cryo-EM structure of SbCas7-11 in complex with crRNA and target RNA

Yu, G., Wang, X., Deng, Z., Zhang, H.

(2022) Nat Microbiol 7: 2078-2088

Released	2022-11-16
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Candidatus Scalindua brodae
Macromolecule	RAMP superfamily protein (protein) RNA (33-MER) (nucleic acid)
Unique Ligands	ZN

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7X7R	Download File View File

Cryo-EM structure of a bacterial protein

Yu, G., Wang, X., Deng, Z., Zhang, H.

(2022) Nat Microbiol 7: 2078-2088

Released	2022-11-16
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Candidatus Scalindua brodae
Macromolecule	RAMP superfamily protein (protein) RNA (36-MER) (nucleic acid) RNA (5'-R(PAPGPUPCPCPGPGPGPGPCPAPGPAPAPAPAPUPUPGPG)-3') (nucleic acid)
Unique Ligands	ZN

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7X8A	Download File View File

Cryo-EM structure of a bacterial protein complex

Yu, G., Wang, X., Deng, Z., Zhang, H.

(2022) Nat Microbiol 7: 2078-2088

Released	2022-11-16
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Candidatus Scalindua brodae
Macromolecule	CHAT domain protein (protein) RAMP superfamily protein (protein) RNA (33-MER) (nucleic acid)
Unique Ligands	ZN

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7XC7	Download File View File

Cryo-EM structure of a bacterial protein complex

Yu, G., Wang, X., Deng, Z., Zhang, H.

(2022) Nat Microbiol 7: 2078-2088

Released	2022-11-16
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Candidatus Scalindua brodae
Macromolecule	CHAT domain protein (protein) RAMP superfamily protein (protein) RNA (33-MER) (nucleic acid) RNA (46-mer) (nucleic acid)
Unique Ligands	ZN

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8GNA	Download File View File

Structure of the SbCas7-11-crRNA-NTR complex

Yu, G., Wang, X., Deng, Z., Zhang, H.

(2022) Nucleic Acids Res 50: 12913-12923

Released	2023-01-18
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Candidatus Scalindua brodae
Macromolecule	RAMP superfamily protein (protein) RNA (32-MER) (nucleic acid) RNA (5'-R(PGPGPGPGPCPAPGPAPAPAPAPUPUPGPGPGP*U)-3') (nucleic acid)
Unique Ligands	ZN

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8GU6	Download File View File

Structure of the SbCas7-11-crRNA-NTR-Csx29 complex

Yu, G., Wang, X., Deng, Z., Zhang, H.

(2022) Nucleic Acids Res 50: 12913-12923

Released	2023-01-18
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Candidatus Scalindua brodae
Macromolecule	CHAT domain protein (protein) RAMP superfamily protein (protein) RNA (33-MER) (nucleic acid) RNA (5'-R(PGPGPGPGPCPAPGPAPAPAPAPUPUPGPGPGP*U)-3') (nucleic acid)
Unique Ligands	ZN

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8J9Y	Download File View File

cryo-EM structure of viral topoisomerase in conformation 1

Deng, Z.

(2023) mBio 14: e0122823-e0122823

Released	2023-08-16
Method	ELECTRON MICROSCOPY 3.16 Å
Organisms	African swine fever virus LIS57
Macromolecule	DNA topoisomerase 2 (protein)

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8J9Z	Download File View File

cryo-EM structure of viral topoisomerase in conformation 2

Deng, Z.

(2023) mBio 14: e0122823-e0122823

Released	2023-08-16
Method	ELECTRON MICROSCOPY 3.13 Å
Organisms	African swine fever virus LIS57
Macromolecule	DNA topoisomerase 2 (protein)

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8XAU	Download File View File

Cryo-EM structure of HerA

Wang, Y., Deng, Z.

(2024) Cell Res 34: 545-555

Released	2024-06-05
Method	ELECTRON MICROSCOPY 3.14 Å
Organisms	Escherichia coli
Macromolecule	ATP-binding protein (protein)

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8XAV	Download File View File

Cryo-EM structure of an anti-phage defense complex

Wang, Y., Deng, Z.

(2024) Cell Res 34: 545-555

Released	2024-06-05
Method	ELECTRON MICROSCOPY 2.87 Å
Organisms	Escherichia coli
Macromolecule	ATP-binding protein (protein) DUF4297 (protein)

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8XAW	Download File View File

Cryo-EM structure of an anti-phage defense complex bound to AMPPNP and DNA at state 1

An, Q., Deng, Z.

(2024) Cell Res 34: 545-555

Released	2024-06-05
Method	ELECTRON MICROSCOPY 2.73 Å
Organisms	Escherichia coli
Macromolecule	ATP-binding protein (protein) DUF4297 (protein) S20DNA1 (nucleic acid) S20DNA2 (nucleic acid)
Unique Ligands	ADP, ANP, MG

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8XAX	Download File View File

Cryo-EM structure of an anti-phage defense complex bound to AMPPNP and DNA at state 2

An, Q., Deng, Z.

(2024) Cell Res 34: 545-555

Released	2024-06-05
Method	ELECTRON MICROSCOPY 2.92 Å
Organisms	Escherichia coli
Macromolecule	ATP-binding protein (protein) DUF4297 (protein) S20DNA1 (nucleic acid) S20DNA2 (nucleic acid)
Unique Ligands	ADP, ANP, MG

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8XAY	Download File View File

Cryo-EM structure of an anti-phage defense complex bound to ATPrS and DNA

An, Q., Deng, Z.

(2024) Cell Res 34: 545-555

Released	2024-06-05
Method	ELECTRON MICROSCOPY 2.81 Å
Organisms	Escherichia coli
Macromolecule	ATP-binding protein (protein) DUF4297 (protein) S20DNA4 (nucleic acid) S20DNA3 (hybrid)
Unique Ligands	ADP, AGS, MG

1 to 18 of 18 Structures

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