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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Bai, F."

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Search Summary

This query matches 60 Structures.

Refinements

Structure Determination Methodology

experimental (60)

Scientific Name of Source Organism

	Homo sapiens (30)
	Escherichia coli (10)
	Severe acute respiratory syndrome coronavirus 2 (9)
	Mus musculus (5)
	synthetic construct (5)
	Acetivibrio thermocellus ATCC 27405 (4)
	Mycobacterium tuberculosis H37Rv (4)
	Lama glama (3)
	Pseudomonas aeruginosa PA14 (3)
	Wolbachia endosymbiont of Drosophila melanogaster (3)

More...

Taxonomy

	Eukaryota (35)
	Bacteria (24)
	Riboviria (9)
	other sequences (5)
	Archaea (1)

Experimental Method

	X-RAY DIFFRACTION (48)
	ELECTRON MICROSCOPY (12)

Polymer Entity Type

Protein (60)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (14)
	2.0 - 2.5 (14)
	2.5 - 3.0 (12)
	3.0 - 3.5 (16)
	3.5 - 4.0 (2)
	> 4.5 (1)

Release Date

	2005 - 2009 (4)
	2010 - 2014 (9)
	2020 - 2024 (46)
	2025 - 2029 (1)

Enzyme Classification Name

	Hydrolases (33)
	Translocases (4)
	Ligases (5)
	Isomerases (1)

Membrane Protein Annotation

	PDBTM (11)
	OPM (6)
	MemProtMD (2)
	mpstruc (3)

Symmetry Type

	Asymmetric (29)
	Cyclic (31)

SCOP Classification

	Alpha and beta proteins (a/b) (8)
	All beta proteins (6)
	Alpha and beta proteins (a+b) (1)

AllSelected

1 to 25 of 60 Structures

Page 1 of 3

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1YA4	Download File View File

Crystal Structure of Human Liver Carboxylesterase 1 in complex with tamoxifen

Fleming, C.D., Bencharit, S., Edwards, C.C., Hyatt, J.L., Morton, C.L., Howard-Williams, E.L., Potter, P.M., Redinbo, M.R.

(2005) J Mol Biol 352: 165-177

Released	2005-08-02
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	CES1 protein (protein)
Unique Ligands	CTX, NAG, SIA, SO4

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1YA8	Download File View File

Crystal Structure of Human Liver Carboxylesterase in complex with cleavage products of Mevastatin

Fleming, C.D., Bencharit, S., Edwards, C.C., Hyatt, J.L., Morton, C.L., Howard-Williams, E.L., Potter, P.M., Redinbo, M.R.

(2005) J Mol Biol 352: 165-177

Released	2005-08-02
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	CES1 protein (protein)
Unique Ligands	MVB, NAG, SIA, SMB, SO4

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1YAH	Download File View File

Crystal Structure of Human Liver Carboxylesterase complexed to Etyl Acetate; A Fatty Acid Ethyl Ester Analogue

Fleming, C.D., Bencahrit, S., Edwards, C.C., Hyatt, J.L., Morton, C.L., Howard-Williams, E.L., Potter, P.M., Redinbo, M.R.

(2005) J Mol Biol 352: 165-177

Released	2005-08-02
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	CES1 protein (protein)
Unique Ligands	EEE, NAG, SIA, SO4

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1YAJ	Download File View File

Crystal Structure of Human Liver Carboxylesterase in complex with benzil

Fleming, C.D., Bencharit, S., Edwards, C.C., Hyatt, J.L., Morton, C.M., Howard-Williams, E.L., Potter, P.M., Redinbo, M.R.

(2005) J Mol Biol 352: 165-177

Released	2005-08-02
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	CES1 protein (protein)
Unique Ligands	BEZ, NAG, SIA, SO4

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3OLD	Download File View File

Crystal structure of alpha-amylase in complex with acarviostatin I03

Qin, X., Ren, L.

(2011) J Struct Biol 174: 196-202

Released	2011-04-13
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Pancreatic alpha-amylase (protein)
Unique Ligands	ACI, CA, CL, MPD, NAG, PCA, SO4
Unique branched monosaccharides	BGC, G6D, GLC

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3OLE	Download File View File

Structures of human pancreatic alpha-amylase in complex with acarviostatin II03

Qin, X., Ren, L.

(2011) J Struct Biol 174: 196-202

Released	2011-04-13
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	Pancreatic alpha-amylase (protein)
Unique Ligands	ACI, CA, CL, MPD, NAG, PCA, SO4
Unique branched monosaccharides	BGC, G6D, GLC

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3OLG	Download File View File

Structures of human pancreatic alpha-amylase in complex with acarviostatin III03

Qin, X., Ren, L.

(2011) J Struct Biol 174: 196-202

Released	2011-04-13
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Pancreatic alpha-amylase (protein)
Unique Ligands	CA, CL, GLC, HSD, PCA, SO4
Unique branched monosaccharides	BGC, G6D, GLC

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3OLI	Download File View File

Structures of human pancreatic alpha-amylase in complex with acarviostatin IV03

Qin, X., Ren, L.

(2011) J Struct Biol 174: 196-202

Released	2011-04-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Pancreatic alpha-amylase (protein)
Unique Ligands	BGC, CA, CL, HSD, MPD, PCA, SO4
Unique branched monosaccharides	G6D, GLC

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3TON	Download File View File

Crystral Structure of the C-terminal Subunit of Human Maltase-Glucoamylase

Shen, Y., Qin, X.H., Ren, L.M.

(2011) Protein Cell 2: 827-836

Released	2011-11-23
Method	X-RAY DIFFRACTION 2.953 Å
Organisms	Homo sapiens
Macromolecule	Maltase-glucoamylase, intestinal (protein)

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3TOP	Download File View File

Crystral Structure of the C-terminal Subunit of Human Maltase-Glucoamylase in Complex with Acarbose

Shen, Y., Qin, X.H., Ren, L.M.

(2011) Protein Cell 2: 827-836

Released	2011-11-23
Method	X-RAY DIFFRACTION 2.881 Å
Organisms	Homo sapiens
Macromolecule	Maltase-glucoamylase, intestinal (protein)
Unique branched monosaccharides	AC1, GLC

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3U18	Download File View File

Chicago Sky Blue 6B, A Novel Inhibitor for Macrophage Migration Inhibitory Factor

Asojo, O.A.

(2012) J Biol Chem 287: 30653-30663

Released	2012-07-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Macrophage migration inhibitory factor (protein)
Unique Ligands	EDO, GOL, IPA, NA, SO4, Y0X

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4IAQ	Download File View File

Crystal structure of the chimeric protein of 5-HT1B-BRIL in complex with dihydroergotamine (PSI Community Target)

Wang, C., Jiang, Y., Ma, J., Wu, H., Wacker, D., Katritch, V., Han, G.W., Liu, W., Huang, X., Vardy, E., McCorvy, J.D., Gao, X., Zhou, E.X., Melcher, K., Zhang, C., Bai, F., Yang, H., Yang, L., Jiang, H., Roth, B.L., Cherezov, V., Stevens, R.C., Xu, H.E., GPCR Network (GPCR)

(2013) Science 340: 610-614

Released	2013-03-13
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli Homo sapiens
Macromolecule	Chimera protein of human 5-hydroxytryptamine receptor 1B and E. Coli soluble cytochrome b562 (protein)
Unique Ligands	2GM

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4IAR	Download File View File

Crystal structure of the chimeric protein of 5-HT1B-BRIL in complex with ergotamine (PSI Community Target)

(2013) Science 340: 610-614

Released	2013-03-13
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Escherichia coli Homo sapiens
Macromolecule	Chimera protein of human 5-hydroxytryptamine receptor 1B and E. Coli soluble cytochrome b562 (protein)
Unique Ligands	ERM, OLB

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6KP6	Download File View File

The structural study of mutation induced inactivation of Human muscarinic receptor M4

Wang, J.J., Wu, M., Wu, L.J., Liu, Z.J., Hua, T.

(2020) IUCrJ 7: 294-305

Released	2020-03-11
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens Pyrococcus abyssi GE5
Macromolecule	Muscarinic acetylcholine receptor M4,GlgA glycogen synthase,Muscarinic acetylcholine receptor M4 (protein)

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6LU7	Download File View File

The crystal structure of COVID-19 main protease in complex with an inhibitor N3

Liu, X., Zhang, B., Jin, Z., Yang, H., Rao, Z.

(2020) Nature 582: 289-293

Released	2020-02-05
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Severe acute respiratory syndrome coronavirus 2 synthetic construct
Macromolecule	3C-like proteinase (protein) N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein)

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6LZE	Download File View File

The crystal structure of COVID-19 main protease in complex with an inhibitor 11a

Zhang, B., Zhang, Y., Jing, Z., Liu, X., Yang, H., Liu, H., Rao, Z., Jiang, H.

(2020) Science 368: 1331-1335

Released	2020-04-29
Method	X-RAY DIFFRACTION 1.505 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein)
Unique Ligands	DMS, FHR

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6M0K	Download File View File

The crystal structure of COVID-19 main protease in complex with an inhibitor 11b

Zhang, B., Zhao, Y., Jin, Z., Liu, X., Yang, H., Liu, H., Rao, Z., Jiang, H.

(2020) Science 368: 1331-1335

Released	2020-04-29
Method	X-RAY DIFFRACTION 1.504 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein)
Unique Ligands	DMS, FJC

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6M2N	Download File View File

SARS-CoV-2 3CL protease (3CL pro) in complex with a novel inhibitor

Su, H.X., Zhao, W.F., Li, M.J., Xie, H., Xu, Y.C.

(2020) Acta Pharmacol Sin 41: 1167-1177

Released	2020-04-15
Method	X-RAY DIFFRACTION 2.198 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein)
Unique Ligands	3WL

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6M2Q	Download File View File

SARS-CoV-2 3CL protease (3CL pro) apo structure (space group C21)

Su, H.X., Zhao, W.F., Li, M.J., Xie, H., Xu, Y.C.

(2020) Acta Pharmacol Sin 41: 1167-1177

Released	2020-04-15
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein)

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6SB1	Download File View File

Crystal structure of murine perforin-2 P2 domain crystal form 1

Ni, T., Ginger, L., Gilbert, R.J.C.

(2020) Sci Adv 6: eaax8286-eaax8286

Released	2020-02-05
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Mus musculus
Macromolecule	Macrophage-expressed gene 1 protein (protein)
Unique Ligands	CL, GOL

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6SB3	Download File View File

CryoEM structure of murine perforin-2 ectodomain in a pre-pore form

Ni, T., Yu, X., Gilbert, R.J.C.

(2020) Sci Adv 6: eaax8286-eaax8286

Released	2020-02-05
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Mus musculus
Macromolecule	Macrophage-expressed gene 1 protein (protein)
Unique Ligands	NAG

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6SB4	Download File View File

Crystal structure of murine perforin-2 P2 domain crystal form 2

Ni, T., Yu, X., Ginger, L., Gilbert, R.J.C.

(2020) Sci Adv 6: eaax8286-eaax8286

Released	2020-02-05
Method	X-RAY DIFFRACTION 3.17 Å
Organisms	Mus musculus
Macromolecule	Macrophage-expressed gene 1 protein (protein)

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6SB5	Download File View File

CryoEM structure of murine perforin-2 ectodomain in a pore form

Ni, T., Yu, X., Gilbert, R.J.C.

(2020) Sci Adv 6: eaax8286-eaax8286

Released	2020-02-05
Method	ELECTRON MICROSCOPY 5 Å
Organisms	Mus musculus
Macromolecule	Macrophage-expressed gene 1 protein (protein)
Unique Ligands	NAG

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7BQY	Download File View File

THE CRYSTAL STRUCTURE OF COVID-19 MAIN PROTEASE IN COMPLEX WITH AN INHIBITOR N3 at 1.7 angstrom

Liu, X., Zhang, B., Jin, Z., Yang, H., Rao, Z.

(2020) Nature 582: 289-293

Released	2020-04-22
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Severe acute respiratory syndrome coronavirus 2 synthetic construct
Macromolecule	3C-like proteinase (protein) N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE (protein)

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7D9O	Download File View File

Crystal Structure of Recombinant Human Acetylcholinesterase in Complex with Compound 2

Liu, Q.F., Yin, W.C.

(2021) J Med Chem 64: 1844-1855

Released	2021-08-25
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens
Macromolecule	Acetylcholinesterase (protein)
Unique Ligands	H0L
Unique branched monosaccharides	FUC, NAG