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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Broos, J."

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Search Summary

This query matches 20 Structures.

Refinements

Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

synthetic construct (1)

Taxonomy

other sequences (1)

Experimental Method

X-RAY DIFFRACTION (20)

Polymer Entity Type

DNA (20)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (4)
	2.0 - 2.5 (10)
	2.5 - 3.0 (4)

Release Date

	1995 - 1999 (8)
	2000 - 2004 (10)
	2010 - 2014 (1)
	2015 - 2019 (1)

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1 to 20 of 20 Structures

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1O0K	Download File View File

Structure of the First Parallel DNA Quadruplex-drug Complex

Clark, G.R., Pytel, P.D., Squire, C.J., Neidle, S.

(2003) J Am Chem Soc 125: 4066-4067

Released	2003-04-15
Method	X-RAY DIFFRACTION 1.17 Å
Macromolecule	5'-D(TPGPGPGPGPT)-3' (nucleic acid)
Unique Ligands	DM1, NA

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1QV4	Download File View File

B-DNA Dodecamer CGTGAATTCACG complexed with minor groove binder methylproamine

Squire, C.J., Clark, G.R.

(2004) Cancer Res 64: 1067-1070

Released	2004-09-07
Method	X-RAY DIFFRACTION 2.5 Å
Macromolecule	5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3' (nucleic acid)
Unique Ligands	MBB

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1QV8	Download File View File

B-DNA Dodecamer d(CGCGAATTCGCG)2 complexed with proamine

Squire, C.J., Clark, G.R.

(2004) Cancer Res 64: 1067-1070

Released	2004-09-07
Method	X-RAY DIFFRACTION 2.5 Å
Macromolecule	5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3' (nucleic acid)
Unique Ligands	BBZ

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263D	Download File View File

ISOHELICITY AND PHASING IN DRUG-DNA SEQUENCE RECOGNITION: CRYSTAL STRUCTURE OF A TRIS(BENZIMIDAZOLE)-OLIGONUCLEOTIDE COMPLEX

Clark, G.R., Gray, E.J., Neidle, S., Li, Y.-H., Leupin, W.

(1996) Biochemistry 35: 13745-13752

Released	1996-10-15
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(CPGPCPAPAPAPTPTPTPGPCPG)-3') (nucleic acid)
Unique Ligands	TBZ

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289D	Download File View File

TARGETING THE MINOR GROOVE OF DNA: CRYSTAL STRUCTURES OF TWO COMPLEXES BETWEEN FURAN DERIVATIVES OF BERENIL AND THE DNA DODECAMER D(CGCGAATTCGCG)2

Trent, J.O., Clark, G.R., Kumar, A., Wilson, W.D., Boykin, D.W., Hall, J.E., Tidwell, R.R., Blagburn, B.L., Neidle, S.

(1996) J Med Chem 39: 4554-4562

Released	1996-12-17
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-R(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	D19

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295D	Download File View File

CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY

Clark, G.R., Brown, D.G., Sanderson, M.R., Chwalinski, T., Neidle, S., Veal, J.M., Jones, R.L., Wilson, W.D., Zon, G., Garman, E., Stuart, D.I.

(1990) Nucleic Acids Res 18: 5521-5528

Released	1996-12-04
Method	X-RAY DIFFRACTION 1.5 Å
Macromolecule	DNA (5'-D(APTPGPCPGPCPAPT)-3') (nucleic acid)

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298D	Download File View File

TARGETING THE MINOR GROOVE OF DNA: CRYSTAL STRUCTURES OF TWO COMPLEXES BETWEEN FURAN DERIVATIVES OF BERENIL AND THE DNA DODECAMER D(CGCGAATTCGCG)2

Trent, J.O., Clark, G.R., Kumar, A., Wilson, W.D., Boykin, D.W., Hall, J.E., Tidwell, R.R., Blagburn, B.L., Neidle, S.

(1996) J Med Chem 39: 4554-4562

Released	1996-12-17
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	D18

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302D	Download File View File

META-HYDROXY ANALOGUE OF HOECHST 33258 ('HYDROXYL IN' CONFORMATION) BOUND TO D(CGCGAATTCGCG)2

Clark, G.R., Squire, C.J., Gray, E.J., Leupin, W., Neidle, S.

(1996) Nucleic Acids Res 24: 4882-4889

Released	1997-01-20
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	MG, RO2

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303D	Download File View File

META-HYDROXY ANALOGUE OF HOECHST 33258 ('HYDROXYL OUT' CONFORMATION) BOUND TO D(CGCGAATTCGCG)2

Clark, G.R., Squire, C.J., Gray, E.J., Leupin, W., Neidle, S.

(1996) Nucleic Acids Res 24: 4882-4889

Released	1997-01-20
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	MG, RO2

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311D	Download File View File

THE ROLE OF HYDROGEN BONDING IN MINOR-GROOVE DRUG-DNA RECOGNITION. STRUCTURE OF A BIS-AMIDINIUM DERIVATIVE OF HOECHST 33258 COMPLEXED TO THE DODECANUCLEOTIDE D(CGCGAATTCGCG)2

Clark, G.R., Boykin, D.W., Czarny, A., Neidle, S.

(1997) Nucleic Acids Res 25: 1510-1515

Released	1997-02-11
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	HT2

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328D	Download File View File

STRUCTURE OF A D(CGCGAATTCGCG)2-SN7167 COMPLEX

Squire, C.J., Clark, G.R., Denny, W.A.

(1997) Nucleic Acids Res 25: 4072-4078

Released	1997-04-23
Method	X-RAY DIFFRACTION 2.6 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	SN7

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3TVB	Download File View File

A Highly Symmetric DNA G-4 Quadruplex/drug Complex

Clark, G.R., Pytel, P.D., Squire, C.J.

(2012) Nucleic Acids Res 40: 5731-5738

Released	2012-03-14
Method	X-RAY DIFFRACTION 1.08 Å
Macromolecule	DNA (5'-D(GPGPGPG)-3') (nucleic acid)
Unique Ligands	DM1, MG, NA

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442D	Download File View File

5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3', BENZIMIDAZOLE DERIVATIVE COMPLEX

Clark, G.R., Squire, C.J., Martin, R.F., White, J.

(2000) Nucleic Acids Res 28: 1252-1258

Released	2000-02-02
Method	X-RAY DIFFRACTION 1.6 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	IB, MG

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443D	Download File View File

5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3'/ BENZIMIDAZOLE DERIVATIVE COMPLEX

Squire, C.J., Baker, L.J., Clark, G.R., Martin, R.F., White, J.

(2000) Nucleic Acids Res 28: 1252-1258

Released	2000-02-02
Method	X-RAY DIFFRACTION 1.6 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	IA, MG

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444D	Download File View File

5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3', BENZIMIDAZOLE DERIVATIVE COMPLEX

Clark, G.R., Squire, C.J., Martin, R.F., White, J.

(2000) Nucleic Acids Res 28: 1252-1258

Released	2000-02-02
Method	X-RAY DIFFRACTION 2.4 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	IB

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445D	Download File View File

5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3', Benzimidazole derivative complex

Squire, C.J., Baker, L.J., Clark, G.R., Martin, R.F., White, J.

(2000) Nucleic Acids Res 28: 1252-1258

Released	2000-02-02
Method	X-RAY DIFFRACTION 2.6 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	IA

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447D	Download File View File

5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3'

Squire, C.J., Baker, L.J., Clark, G.R., Martin, R.F., White, J.

(2000) Nucleic Acids Res 28: 1252-1258

Released	2000-03-06
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	BBZ

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448D	Download File View File

5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3', BENZIMIDAZOLE DERIVATIVE COMPLEX

Clark, G.R., Squire, C.J., Martin, R.F., White, J.

(2000) Nucleic Acids Res 28: 1252-1258

Released	2000-02-02
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	IB

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449D	Download File View File

5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3', BENZIMIDAZOLE DERIVATIVE COMPLEX

Squire, C.J., Baker, L.J., Clark, G.R., Martin, R.F., White, J.

(2000) Nucleic Acids Res 28: 1252-1258

Released	2000-02-02
Method	X-RAY DIFFRACTION 2.1 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	IA

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5DAM	Download File View File

Crystal Structure of p-iodoHoechst bound to d(CGCAAATTTGCG)

Clark, G.R.

(2016) Int J Radiat Biol

Released	2016-03-16
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	synthetic construct
Macromolecule	DNA (5'-D(CPGPCPAPAPAPTPTPTPGPCPG)-3') (nucleic acid)
Unique Ligands	58F, MG

1 to 20 of 20 Structures

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