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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Dreier, B."

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Search Summary

This query matches 39 Structures.

Refinements

Structure Determination Methodology

experimental (39)

Scientific Name of Source Organism

	synthetic construct (30)
	Homo sapiens (12)
	Ovis aries (8)
	Bos taurus (7)
	Human adenovirus 5 (3)
	Human immunodeficiency virus 1 (3)
	Lama glama (3)
	Helicobacter pylori 26695 (2)
	Mus musculus (2)
	Archaeoglobus fulgidus DSM 4304 (1)

More...

Taxonomy

	other sequences (30)
	Eukaryota (28)
	Bacteria (3)
	Riboviria (3)
	Varidnaviria (3)
	Archaea (1)
	Duplodnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (30)
	ELECTRON MICROSCOPY (9)

Polymer Entity Type

Protein (39)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (9)
	2.0 - 2.5 (10)
	2.5 - 3.0 (4)
	3.0 - 3.5 (2)
	3.5 - 4.0 (3)
	4.0 - 4.5 (5)
	> 4.5 (3)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (6)
	2015 - 2019 (8)
	2020 - 2024 (23)
	2025 - 2029 (1)

Enzyme Classification Name

	Lyases (7)
	Hydrolases (4)

Membrane Protein Annotation

	MemProtMD (4)
	OPM (4)
	PDBTM (4)

Symmetry Type

	Asymmetric (31)
	Cyclic (8)

SCOP Classification

	Alpha and beta proteins (a+b) (5)
	Alpha and beta proteins (a/b) (4)
	All beta proteins (2)
	Artifacts (6)

AllSelected

1 to 25 of 39 Structures

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3HG0	Download File View File

Crystal structure of a DARPin in complex with ORF49 from Lactococcal phage TP901-1

Veesler, D., Dreier, B., Blangy, S., Lichiere, J., Tremblay, D., Moineau, S., Spinelli, S., Tegoni, M., Pluckthun, A., Campanacci, V., Cambillau, C.

(2009) J Biol Chem 284: 30718-30726

Released	2009-09-08
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Lactococcus phage TP901-1 synthetic construct
Macromolecule	Baseplate protein (protein) Designed Ankyrin Repeat Protein (DARPin) 20 (protein)

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4ATZ	Download File View File

Ad5 knob in complex with a designed ankyrin repeat protein

Mittl, P.R.E., Hess, C., Dreier, B.

(2013) Proc Natl Acad Sci U S A 110: E869-E877

Released	2013-02-27
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Human adenovirus 5 synthetic construct
Macromolecule	DESIGNED ANKYRIN REPEAT PROTEIN (protein) Fiber protein (protein)

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4DRX	Download File View File

GTP-Tubulin in complex with a DARPIN

Pecqueur, L., Gigant, B., Knossow, M.

(2012) Proc Natl Acad Sci U S A 109: 12011-12016

Released	2012-07-11
Method	X-RAY DIFFRACTION 2.22 Å
Organisms	Ovis aries synthetic construct
Macromolecule	Designed ankyrin repeat protein (DARPIN) D1 (protein) Tubulin alpha chain (protein) Tubulin beta chain (protein)
Unique Ligands	GTP, MG

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4DUI	Download File View File

DARPIN D1 binding to tubulin beta chain (not in complex)

Pecqueur, L., Duellberg, C., Dreier, B., Wang, Q., Jiang, C., Pluckthun, A., Surrey, T., Gigant, B., Knossow, M.

To be published

Released	2013-02-27
Method	X-RAY DIFFRACTION 1.16 Å
Organisms	synthetic construct
Macromolecule	DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) D1 (protein)
Unique Ligands	MPD, MRD

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4F61	Download File View File

Tubulin:Stathmin-like domain complex

Gigant, B., Mignot, I., Knossow, M.

(2012) J Biol Chem 287: 31085-31094

Released	2012-07-18
Method	X-RAY DIFFRACTION 4.17 Å
Organisms	Ovis aries synthetic construct
Macromolecule	Stathmin-like domain R4 (protein) Tubulin alpha chain (protein) Tubulin beta chain (protein)
Unique Ligands	GDP, GTP, MG

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4F6R	Download File View File

Tubulin:Stathmin-like domain complex

Gigant, B., Mignot, I., Knossow, M.

(2012) J Biol Chem 287: 31085-31094

Released	2012-07-18
Method	X-RAY DIFFRACTION 2.64 Å
Organisms	Ovis aries synthetic construct
Macromolecule	Designed ankyrin repeat protein (DARPIN) D2 (protein) Stathmin-like domain R1 (protein) Tubulin alpha chain (protein) Tubulin beta chain (protein)
Unique Ligands	GDP, GTP, MES, MG, SO4

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4HNA	Download File View File

Kinesin motor domain in the ADP-MG-ALFX state in complex with tubulin and a DARPIN

Gigant, B., Knossow, M.

(2013) Nat Struct Mol Biol 20: 1001-1007

Released	2013-06-12
Method	X-RAY DIFFRACTION 3.19 Å
Organisms	Homo sapiens Ovis aries synthetic construct
Macromolecule	DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) D2 (protein) Kinesin-1 heavy chain (protein) Tubulin alpha chain (protein) Tubulin beta chain (protein)
Unique Ligands	ADP, ALF, GDP, GTP, MG

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5EYL	Download File View File

TUBULIN-BINDING DARPIN

Ahmad, S., Kossow, M., Gigant, B.

(2016) Sci Rep 6: 28922-28922

Released	2016-07-20
Method	X-RAY DIFFRACTION 2.41 Å
Organisms	synthetic construct
Macromolecule	DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) (protein)
Unique Ligands	GOL, PO4

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5EYP	Download File View File

TUBULIN-DARPIN COMPLEX

Ahmad, S., Knossow, M., Gigant, B.

(2016) Sci Rep 6: 28922-28922

Released	2016-07-20
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Ovis aries synthetic construct
Macromolecule	DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) (protein) Tubulin alpha chain (protein) Tubulin beta chain (protein)
Unique Ligands	GDP, GOL, GTP, LOC, MG, SO4

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5OGI	Download File View File

Complex of a binding protein and human adenovirus C 5 hexon

Schmid, M., Ernst, P., Honegger, A., Suomalainen, M., Zimmermann, M., Braun, L., Stauffer, S., Thom, C., Dreier, B., Eibauer, M., Kipar, A., Vogel, V., Greber, U.F., Medalia, O., Plueckthun, A.

(2018) Nat Commun 9: 450-450

Released	2018-02-07
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Human adenovirus 5 Mus musculus
Macromolecule	Hexon protein (protein) scFv of 9C12 antibody (protein)
Unique Ligands	DIO, EDO, MES, SO4

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6EQC	Download File View File

Cryo-EM reconstruction of a complex of a binding protein and human adenovirus C5 hexon

Schmid, M., Ernst, P., Honegger, A., Suomalainen, M., Zimmermann, M., Braun, L., Stauffer, S., Thom, C., Dreier, B., Eibauer, M., Kipar, A., Vogel, V., Greber, U.F., Medalia, O., Plueckthun, A.

(2018) Nat Commun 9: 450-450

Released	2018-02-07
Method	ELECTRON MICROSCOPY 7.4 Å
Organisms	Human adenovirus 5 Mus musculus
Macromolecule	Hexon protein (protein) scFv of 9C12 antibody (protein)

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6FX7	Download File View File

Crystal structure of in vitro evolved Af1521

Karlberg, T., Thorsell, A.G., Nowak, K., Hottiger, M.O., Schuler, H.

(2020) Nat Commun 11: 5199-5199

Released	2019-09-25
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Archaeoglobus fulgidus DSM 4304
Macromolecule	[Protein ADP-ribosylglutamate] hydrolase AF_1521 (protein)
Unique Ligands	AR6

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6GVM	Download File View File

Tubulin:F3II DARPin complex

Gigant, B., Campanacci, V., Cantos Fernandes, S.

(2019) Proc Natl Acad Sci U S A 116: 9859-9864

Released	2019-04-24
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Ovis aries synthetic construct
Macromolecule	F3II DARPIN (protein) STATHMIN-LIKE DOMAIN R1 (protein) Tubulin alpha chain (protein) Tubulin beta chain (protein)
Unique Ligands	GDP, GTP, MG

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6GVN	Download File View File

Tubulin:TM-3 DARPin complex

Gigant, B., Cantos Fernandes, S., Campanacci, V.

(2019) Proc Natl Acad Sci U S A 116: 9859-9864

Released	2019-04-24
Method	X-RAY DIFFRACTION 2.69 Å
Organisms	Ovis aries synthetic construct
Macromolecule	TM-3 DARPIN (protein) Tubulin alpha chain (protein) Tubulin beta chain (protein)
Unique Ligands	GOL, GTP, MES, MG, SO4

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6GX7	Download File View File

Tubulin-CopN-alphaRep complex

Gigant, B., Campanacci, V.

(2019) Proc Natl Acad Sci U S A 116: 9859-9864

Released	2019-04-24
Method	X-RAY DIFFRACTION 3.19 Å
Organisms	Chlamydia pneumoniae Ovis aries synthetic construct
Macromolecule	Low calcium response E (protein) Tubulin alpha chain (protein) Tubulin beta chain (protein) iiiA5 ALPHAREP (protein)
Unique Ligands	GOL, GTP, MES, MG, PGE, SO4

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7PD4	Download File View File

structure of Adenylyl cyclase 9 in complex with MANT-GTP

Qi, C., Korkhov, V.M.

(2022) Nat Commun 13: 1045-1045

Released	2022-01-19
Method	ELECTRON MICROSCOPY 4.9 Å
Organisms	Bos taurus
Macromolecule	Adenylate cyclase 9 (protein)

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7PD8	Download File View File

Structure of Adenylyl cyclase 9 in complex with DARPin C4 and MANT-GTP

Qi, C., Korkhov, V.M.

(2022) Nat Commun 13: 1045-1045

Released	2022-01-19
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Bos taurus synthetic construct
Macromolecule	Adenylate cyclase 9 (protein) DARPin C4 (protein)

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7PDD	Download File View File

Focus refinement of soluble domain of Adenylyl cyclase 9 in complex with DARPin C4 and MANT-GTP

Qi, C., Korkhov, V.M.

(2022) Nat Commun 13: 1045-1045

Released	2022-01-19
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Bos taurus synthetic construct
Macromolecule	Adenylate cyclase 9 (protein) DARPin C4 (protein)

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7PDE	Download File View File

Structure of Adenylyl cyclase 9 in complex with Gs protein alpha subunit and MANT-GTP

Qi, C., Korkhov, V.M.

(2022) Nat Commun 13: 1045-1045

Released	2022-01-19
Method	ELECTRON MICROSCOPY 4.5 Å
Organisms	Bos taurus
Macromolecule	Adenylate cyclase 9 (protein) Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein)
Unique Ligands	GSP, MG

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7PDF	Download File View File

focus refinement of soluble domain of adenylyl cyclase 9 in complex with Gs protein alpha subunit and MANT-GTP

Qi, C., Korkhov, V.M.

(2022) Nat Commun 13: 1045-1045

Released	2022-01-26
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Bos taurus
Macromolecule	Adenylate cyclase 9 (protein) Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein)
Unique Ligands	GSP, MG

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7PDG	Download File View File

structure of adenylyl cyclase 9 in complex with DARPin C4 and ATP-aS

Qi, C., Korkhov, V.M.

(2022) Nat Commun 13: 1045-1045

Released	2022-01-19
Method	ELECTRON MICROSCOPY 4.3 Å
Organisms	Bos taurus synthetic construct
Macromolecule	Adenylate cyclase 9 (protein) DARPin C4 (protein)

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7PDH	Download File View File

structure of adenylyl cyclase 9 in complex with DARPin C4 and ATP-aS

Qi, C., Korkhov, V.M.

(2022) Nat Commun 13: 1045-1045

Released	2022-01-19
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Bos taurus synthetic construct
Macromolecule	Adenylate cyclase 9 (protein) DARPin C4 (protein)

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7TXD	Download File View File

Cryo-EM structure of BG505 SOSIP HIV-1 Env trimer in complex with CD4 receptor (D1D2) and broadly neutralizing darpin bnD.9

Cerutti, G., Gorman, J., Kwong, P.D., Shapiro, L.

(2023) Nat Struct Mol Biol 30: 1323-1336

Released	2023-04-12
Method	ELECTRON MICROSCOPY 3.87 Å
Organisms	Homo sapiens Human immunodeficiency virus 1 synthetic construct
Macromolecule	Broadly neutralizing darpin bnd.9 (protein) Envelope glycoprotein gp120 (protein) Envelope glycoprotein gp41 (protein) T-cell surface glycoprotein CD4 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7Z71	Download File View File

Crystal structure of p63 DBD in complex with darpin C14

Chaikuad, A., Strubel, A., Doetsch, V., Knapp, S., Structural Genomics Consortium (SGC)

(2022) Cell Death Differ 29: 2445-2458

Released	2022-07-06
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Darpin C14 (protein) Isoform 4 of Tumor protein 63 (protein)
Unique Ligands	ZN

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7Z72	Download File View File

Crystal structure of p63 SAM in complex with darpin A5

Chaikuad, A., Strubel, A., Doetsch, V., Knapp, S., Structural Genomics Consortium (SGC)

(2022) Cell Death Differ 29: 2445-2458

Released	2022-07-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Darpin A5 (protein) Isoform 9 of Tumor protein 63 (protein)
Unique Ligands	PEG

1 to 25 of 39 Structures

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