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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Miller, B.C."

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Search Summary

This query matches 8 Structures.

Refinements

Structure Determination Methodology

experimental (8)

Scientific Name of Source Organism

	Pseudomonas putida (5)
	Homo sapiens (3)

Taxonomy

	Bacteria (5)
	Eukaryota (3)

Experimental Method

X-RAY DIFFRACTION (8)

Polymer Entity Type

Protein (8)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (4)
	2.5 - 3.0 (2)

Release Date

	2010 - 2014 (6)
	2020 - 2024 (2)

Enzyme Classification Name

Oxidoreductases (3)

Symmetry Type

	Asymmetric (5)
	Cyclic (3)

SCOP Classification

	All beta proteins (6)
	Alpha and beta proteins (a+b) (5)

AllSelected

1 to 8 of 8 Structures

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3QXE \| pdb_00003qxe	Download File View File

Crystal Structure of Co-type Nitrile Hydratase from Pseudomonas putida.

Brodkin, H.R., Novak, W.R.P., Ringe, D., Petsko, G.A.

(2011) Biochemistry 50: 4923-4935

Released	2011-03-23
Method	X-RAY DIFFRACTION 2.104 Å
Organisms	Pseudomonas putida
Macromolecule	Co-type Nitrile Hydratase alpha subunit (protein) Co-type Nitrile Hydratase beta subunit (protein)
Unique Ligands	3CO, GOL

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3QYG \| pdb_00003qyg	Download File View File

Crystal Structure of Co-type Nitrile Hydratase beta-E56Q from Pseudomonas putida.

Brodkin, H.R., Novak, W.R.P., Ringe, D., Petsko, G.A.

(2011) Biochemistry 50: 4923-4935

Released	2011-03-23
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas putida
Macromolecule	Co-type Nitrile Hydratase alpha subunit (protein) Co-type Nitrile Hydratase beta subunit (protein)
Unique Ligands	3CO, GOL

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3QYH \| pdb_00003qyh	Download File View File

Crystal Structure of Co-type Nitrile Hydratase beta-H71L from Pseudomonas putida.

Brodkin, H.R., Novak, W.R.P., Ringe, D., Petsko, G.A.

(2011) Biochemistry 50: 4923-4935

Released	2011-03-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas putida
Macromolecule	Co-type Nitrile Hydratase alpha subunit (protein) Co-type Nitrile Hydratase beta subunit (protein)
Unique Ligands	3CO

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3QZ5 \| pdb_00003qz5	Download File View File

Crystal Structure of Co-type Nitrile Hydratase alpha-E168Q from Pseudomonas putida.

Brodkin, H.R., Novak, W.R.P., Ringe, D., Petsko, G.A.

(2011) Biochemistry 50: 4923-4935

Released	2011-03-23
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pseudomonas putida
Macromolecule	Co-type Nitrile Hydratase alpha subunit (protein) Co-type Nitrile Hydratase beta subunit (protein)
Unique Ligands	3CO, GOL

Explore in 3D

3QZ9 \| pdb_00003qz9	Download File View File

Crystal structure of Co-type nitrile hydratase beta-Y215F from Pseudomonas putida.

Brodkin, H.R., Novak, W.R.P., Ringe, D., Petsko, G.A.

(2011) Biochemistry 50: 4923-4935

Released	2011-03-23
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Pseudomonas putida
Macromolecule	Co-type Nitrile Hydratase alpha subunit (protein) Co-type Nitrile Hydratase beta subunit (protein)
Unique Ligands	3CO, GOL

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4FF9 \| pdb_00004ff9	Download File View File

Crystal Structure of cysteinylated WT SOD1.

Auclair, J.R., Brodkin, H.R., D'Aquino, J.A., Ringe, D., Petsko, G.A., Agar, J.N.

(2013) Biochemistry 52: 6145-6150

Released	2013-09-04
Method	X-RAY DIFFRACTION 2.5003 Å
Organisms	Homo sapiens
Macromolecule	Superoxide dismutase [Cu-Zn] (protein)
Unique Ligands	CU, CYS, ZN

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8CCX \| pdb_00008ccx	Download File View File

Human SOD1 in complex with S-XL6 cross-linker

Antonyuk, S.V., Hossain, A., Agar, J.N., Hasnain, S.S.

(2024) PLoS Biol 22: e3002462-e3002462

Released	2023-12-13
Method	X-RAY DIFFRACTION 1.665 Å
Organisms	Homo sapiens
Macromolecule	Superoxide dismutase [Cu-Zn] (protein)
Unique Ligands	CU, DMS, SO4, UDI, ZN

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8Q6M \| pdb_00008q6m	Download File View File

Human SOD1 low dose data collecton

Antonyuk, S.V., Hossain, A., Agar, J.N., Hasnain, S.S.

(2024) PLoS Biol 22: e3002462-e3002462

Released	2023-12-13
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Homo sapiens
Macromolecule	Superoxide dismutase [Cu-Zn] (protein)
Unique Ligands	ACT, CU, SO4, ZN

1 to 8 of 8 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3QXE | pdb_00003qxe

Crystal Structure of Co-type Nitrile Hydratase from Pseudomonas putida.

3QYG | pdb_00003qyg

Crystal Structure of Co-type Nitrile Hydratase beta-E56Q from Pseudomonas putida.

3QYH | pdb_00003qyh

Crystal Structure of Co-type Nitrile Hydratase beta-H71L from Pseudomonas putida.

3QZ5 | pdb_00003qz5

Crystal Structure of Co-type Nitrile Hydratase alpha-E168Q from Pseudomonas putida.

3QZ9 | pdb_00003qz9

Crystal structure of Co-type nitrile hydratase beta-Y215F from Pseudomonas putida.

4FF9 | pdb_00004ff9

Crystal Structure of cysteinylated WT SOD1.

8CCX | pdb_00008ccx

Human SOD1 in complex with S-XL6 cross-linker

8Q6M | pdb_00008q6m

Human SOD1 low dose data collecton

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3QXE | pdb_00003qxe

3QYG | pdb_00003qyg

3QYH | pdb_00003qyh

3QZ5 | pdb_00003qz5

3QZ9 | pdb_00003qz9

4FF9 | pdb_00004ff9

8CCX | pdb_00008ccx

8Q6M | pdb_00008q6m