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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Mizogucji, T.J."

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Search Summary

This query matches 53 Structures.

Refinements

Structure Determination Methodology

experimental (53)

Scientific Name of Source Organism

	Cupriavidus metallidurans CH34 (9)
	Stenotrophomonas maltophilia (9)
	Gallus gallus (6)
	Escherichia coli (3)
	Thaumatococcus daniellii (3)
	Aspergillus flavus (2)
	Fluoribacter gormanii (2)
	Leiurus quinquestriatus (2)
	Streptococcus pneumoniae R6 (2)
	Actinoplanes missouriensis (1)

More...

Taxonomy

	Bacteria (29)
	Eukaryota (19)
	Duplodnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (52)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (49)
	DNA (4)

Refinement Resolution (Å)

	1.0 - 1.5 (9)
	1.5 - 2.0 (30)
	2.0 - 2.5 (9)
	2.5 - 3.0 (1)
	3.5 - 4.0 (1)
	4.0 - 4.5 (2)

Release Date

	1995 - 1999 (4)
	2000 - 2004 (7)
	2005 - 2009 (22)
	2010 - 2014 (18)
	2015 - 2019 (2)

Enzyme Classification Name

	Hydrolases (20)
	Isomerases (4)
	Oxidoreductases (3)
	Transferases (1)

Membrane Protein Annotation

	OPM (2)
	MemProtMD (1)
	PDBTM (1)

Symmetry Type

	Asymmetric (29)
	Cyclic (18)
	Dihedral (5)
	Tetrahedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (24)
	Alpha and beta proteins (a/b) (4)
	All beta proteins (5)
	Small proteins (3)
	Artifacts (2)
	All alpha proteins (1)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 25 of 53 Structures

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1BEO	Download File View File

BETA-CRYPTOGEIN

Boissy, G., De La Fortelle, E., Kahn, R., Huet, J.C., Bricogne, G., Pernollet, J.C., Brunie, S.

(1996) Structure 4: 1429-1439

Released	1997-05-15
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Phytophthora cryptogea
Macromolecule	BETA-CRYPTOGEIN (protein)

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1BHW	Download File View File

LOW TEMPERATURE MIDDLE RESOLUTION STRUCTURE OF XYLOSE ISOMERASE FROM MASC DATA

Ramin, M., Shepard, W., Fourme, R., Kahn, R.

(1999) Acta Crystallogr D Biol Crystallogr 55: 157-167

Released	1998-11-04
Method	X-RAY DIFFRACTION 4.1 Å
Organisms	Actinoplanes missouriensis
Macromolecule	XYLOSE ISOMERASE (protein)

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1BHY	Download File View File

LOW TEMPERATURE MIDDLE RESOLUTION STRUCTURE OF P64K FROM MASC DATA

Ramin, M., Shepard, W., Fourme, R., Kahn, R.

(1999) Acta Crystallogr D Biol Crystallogr 55: 157-167

Released	1998-11-04
Method	X-RAY DIFFRACTION 4.18 Å
Organisms	Neisseria meningitidis
Macromolecule	P64K (protein)
Unique Ligands	FAD

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1BHZ	Download File View File

LOW TEMPERATURE MIDDLE RESOLUTION STRUCTURE OF HEN EGG WHITE LYSOZYME FROM MASC DATA

Ramin, M., Shepard, W., Fourme, R., Kahn, R.

(1999) Acta Crystallogr D Biol Crystallogr 55: 157-167

Released	1998-11-04
Method	X-RAY DIFFRACTION 3.9 Å
Organisms	Gallus gallus
Macromolecule	LYSOZYME (protein)

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1DXH	Download File View File

Catabolic ornithine carbamoyltransferase from Pseudomonas aeruginosa

Sainz, G., Vicat, J., Kahn, R., Duee, E., Tricot, C., Stalon, V., Dideberg, O.

To be published

Released	2001-01-12
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	ORNITHINE CARBAMOYLTRANSFERASE (protein)
Unique Ligands	SO4

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1H87	Download File View File

Gadolinium derivative of tetragonal Hen Egg-White Lysozyme at 1.7 A resolution

Girard, E., Chantalat, L., Vicat, J., Kahn, R.

(2001) Acta Crystallogr D Biol Crystallogr 58: 1

Released	2002-01-15
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Gallus gallus
Macromolecule	LYSOZYME C (protein)
Unique Ligands	CL, DO3, GD

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1KTW	Download File View File

IOTA-CARRAGEENASE COMPLEXED TO IOTA-CARRAGEENAN FRAGMENTS

Michel, G., Kahn, R., Dideberg, O.

(2003) J Mol Biol 334: 421-433

Released	2003-06-10
Method	X-RAY DIFFRACTION 2 Å
Organisms	Alteromonas macleodii
Macromolecule	IOTA-CARRAGEENASE (protein)
Unique Ligands	CA, CL, NA
Unique branched monosaccharides	DGS, G4S

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1OKC	Download File View File

structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside

Pebay-Peyroula, E., Dahout-Gonzalez, C., Kahn, R., Trezeguet, V., Lauquin, G.J.-M., Brandolin, G.

(2003) Nature 426: 39

Released	2003-11-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bos taurus
Macromolecule	ADP, ATP CARRIER PROTEIN HEART ISOFORM T1 (protein)
Unique Ligands	CDL, CXT, LDM, PC1

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1Q6H	Download File View File

Crystal structure of a truncated form of FkpA from Escherichia coli

Saul, F.A., Arie, J.-P., Vulliez-le Normand, B., Kahn, R., Betton, J.-M., Bentley, G.A.

(2004) J Mol Biol 335: 595-608

Released	2004-01-13
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Escherichia coli
Macromolecule	FKBP-type peptidyl-prolyl cis-trans isomerase fkpA (protein)

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1Q6I	Download File View File

Crystal structure of a truncated form of FkpA from Escherichia coli, in complex with immunosuppressant FK506

Saul, F.A., Arie, J.-P., Vulliez-le Normand, B., Kahn, R., Betton, J.-M., Bentley, G.A.

(2004) J Mol Biol 335: 595-608

Released	2004-01-13
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Escherichia coli
Macromolecule	FKBP-type peptidyl-prolyl cis-trans isomerase fkpA (protein)
Unique Ligands	FK5

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1Q6U	Download File View File

Crystal structure of FkpA from Escherichia coli

Saul, F.A., Arie, J.-P., Vulliez-le Normand, B., Kahn, R., Betton, J.-M., Bentley, G.A.

(2004) J Mol Biol 335: 595-608

Released	2004-01-13
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Escherichia coli
Macromolecule	FKBP-type peptidyl-prolyl cis-trans isomerase fkpA (protein)
Unique Ligands	CS

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2ASC	Download File View File

Scorpion toxin LQH-alpha-IT

Kahn, R., Karbat, I., Gurevitz, M., Frolow, F.

To be published

Released	2006-09-05
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Leiurus quinquestriatus
Macromolecule	neurotoxin alpha-IT (protein)
Unique Ligands	CL, DR0, DR8, EDO, EOH, K, MOH, NO3

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2ATB	Download File View File

Triple mutant 8D9D10V of scorpion toxin LQH-alpha-IT

Kahn, R., Karbat, I., Gurevitz, M., Frolow, F.

To be published

Released	2006-09-05
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Leiurus quinquestriatus
Macromolecule	neurotoxin alpha-IT (protein)
Unique Ligands	CL, EDO, NO3

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2FM6	Download File View File

Zinc-beta-lactamase L1 from stenotrophomonas maltophilia (native form)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biol 375: 257-269

Released	2007-01-16
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	GOL, SO4, ZN

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2FU6	Download File View File

Zinc-beta-lactamase l1 from stenotrophomonas maltophilia (apo form)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

To be published

Released	2007-01-30
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	GOL, SO4

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2FU7	Download File View File

Zinc-beta-lactamase L1 from stenotrophomonas maltophilia (Cu-substituted form)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biol 375: 257-269

Released	2007-01-30
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	CU, GOL, PHN, SO4

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2FU8	Download File View File

Zinc-beta-lactamase L1 from stenotrophomonas maltophilia (d-captopril complex)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biol 375: 257-269

Released	2007-01-30
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	GOL, MCO, SO4, ZN

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2FU9	Download File View File

Zinc-beta-lactamase L1 from stenotrophomonas maltophilia (mp2 inhibitor complex)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biol 375: 257-269

Released	2007-01-30
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	GOL, MP2, SO4, ZN

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2GFJ	Download File View File

Crystal structure of the zinc-beta-lactamase L1 from stenotrophomonas maltophilia (inhibitor 1)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biol 375: 257-269

Released	2007-03-27
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	SO4, VI, ZN

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2GFK	Download File View File

Crystal structure of the zinc-beta-lactamase l1 from stenotrophomonas maltophilia (inhibitor 2)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biol 375: 257-269

Released	2007-03-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	PEG, SO4, VII, ZN

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2H6A	Download File View File

Crystal structure of the zinc-beta-lactamase L1 from Stenotrophomonas maltophilia (mono zinc form)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biol 375: 257-269

Released	2007-04-17
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	SO4, ZN

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2HB9	Download File View File

Crystal Structure of the Zinc-Beta-Lactamase L1 from Stenotrophomonas Maltophilia (Inhibitor 3)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biol 375: 257-269

Released	2007-05-29
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	L13, SO4, ZN

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2KSQ	Download File View File

The myristoylated yeast ARF1 in a GTP and bicelle bound conformation

Liu, Y., Kahn, R., Prestegard, J.

(2010) Nat Struct Mol Biol 17: 876-881

Released	2010-07-07
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae
Macromolecule	ADP-ribosylation factor 1 (protein)
Unique Ligands	GTP, MTN

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2PC2	Download File View File

Lysozyme Cocrystallized with Tris-dipicolinate Eu complex

Pompidor, G., Vicat, J., Kahn, R.

(2010) Acta Crystallogr D Biol Crystallogr 66: 762-769

Released	2008-04-01
Method	X-RAY DIFFRACTION 1.538 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	CL, EU, PDC

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2PE7	Download File View File

Thaumatin from Thaumatococcus Danielli in complex with tris-dipicolinate Europium

Pompidor, G., Vicat, J., Kahn, R.

(2010) Acta Crystallogr D Biol Crystallogr 66: 762-769

Released	2008-04-22
Method	X-RAY DIFFRACTION 1.46 Å
Organisms	Thaumatococcus daniellii
Macromolecule	Preprothaumatin I (protein)
Unique Ligands	EU, PDC, TLA

1 to 25 of 53 Structures

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