RCSB PDB: Search

1VSO \| pdb_00001vso	Download File View File

Crystal Structure of the Ligand-Binding Core of iGluR5 in Complex With the Antagonist (S)-ATPO at 1.85 A resolution

Hald, H., Naur, P., Gajhede, M., Kastrup, J.S.

(2007) J Biological Chem 282: 25726-25736

Released	2007-07-03
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	AT1, GOL

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1YCJ \| pdb_00001ycj	Download File View File

Crystal structure of the kainate receptor GluR5 ligand-binding core in complex with (S)-glutamate

Naur, P., Vestergaard, B., Skov, L.K., Egebjerg, J., Gajhede, M., Kastrup, J.S.

(2005) FEBS Lett 579: 1154-1160

Released	2005-02-01
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Rattus norvegicus
Macromolecule	Ionotropic glutamate receptor 5 (protein)
Unique Ligands	GLU, SO4

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2ANJ \| pdb_00002anj	Download File View File

Crystal Structure of the Glur2 Ligand Binding Core (S1S2J-Y450W) Mutant in Complex With the Partial Agonist Kainic Acid at 2.1 A Resolution

Holm, M.M., Naur, P., Vestergaard, B., Geballe, M.T., Gajhede, M., Kastrup, J.S., Traynelis, S.F., Egebjerg, J.

(2005) J Biological Chem 280: 35469-35476

Released	2005-08-30
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 2 (protein)
Unique Ligands	KAI

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2PBW \| pdb_00002pbw	Download File View File

Crystal Structure of the Ligand-Binding Core of iGluR5 in Complex with the Partial agonist Domoic Acid at 2.5 A Resolution

Hald, H., Naur, P., Gajhede, M., Kastrup, J.S.

(2007) J Biological Chem 282: 25726-25736

Released	2007-07-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	DOQ

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2V3T \| pdb_00002v3t	Download File View File

Structure of the ligand-binding core of the ionotropic glutamate receptor-like GluRdelta2 in the apo form

Naur, P., Vestergaard, B., Gajhede, M., Kastrup, J.S.

(2007) Proc Natl Acad Sci U S A 104: 14116

Released	2007-08-07
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Rattus norvegicus
Macromolecule	GLUTAMATE RECEPTOR DELTA-2 SUBUNIT SYNONYM GLURDELTA2, GLUR DELTA-2 (protein)
Unique Ligands	CA

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2V3U \| pdb_00002v3u	Download File View File

Structure of the ligand-binding core of the ionotropic glutamate receptor-like GluRdelta2 in complex with D-serine

Naur, P., Vestergaard, B., Gajhede, M., Kastrup, J.S.

(2007) Proc Natl Acad Sci U S A 104: 14116

Released	2007-08-07
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Rattus norvegicus
Macromolecule	GLUTAMATE RECEPTOR DELTA-2 SUBUNIT (protein)
Unique Ligands	CL, DSN, NA, SCN

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2WKY \| pdb_00002wky	Download File View File

Crystal structure of the ligand-binding core of GluR5 in complex with the agonist 4-AHCP

Naur, P., Gajhede, M., Kastrup, J.S.

(2009) J Med Chem 52: 4911

Released	2009-07-21
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Rattus norvegicus
Macromolecule	GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 1 (protein)
Unique Ligands	CL, IBC

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3FAS \| pdb_00003fas	Download File View File

X-ray structure of iGluR4 flip ligand-binding core (S1S2) in complex with (S)-glutamate at 1.40A resolution

Kasper, C., Frydenvang, K., Naur, P., Gajhede, M., Kastrup, J.S.

(2008) FEBS Lett 582: 4089-4094

Released	2008-12-09
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 4 (protein)
Unique Ligands	GLU, GOL, SO4

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3FAT \| pdb_00003fat	Download File View File

X-ray structure of iGluR4 flip ligand-binding core (S1S2) in complex with (S)-AMPA at 1.90A resolution

Kasper, C., Frydenvang, K., Naur, P., Gajhede, M., Kastrup, J.S.

(2008) FEBS Lett 582: 4089-4094

Released	2008-12-09
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 4 (protein)
Unique Ligands	ACY, AMQ, GOL, SO4

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3GBA \| pdb_00003gba	Download File View File

X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with dysiherbaine at 1.35A resolution

Frydenvang, K., Naur, P., Gajhede, M., Kastrup, J.S.

(2009) J Biological Chem 284: 14219-14229

Released	2009-03-17
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	CL, DYH, GOL, SO4

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3GBB \| pdb_00003gbb	Download File View File

X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with MSVIII-19 at 2.10A resolution

Frydenvang, K., Naur, P., Gajhede, M., Kastrup, J.S.

(2009) J Biological Chem 284: 14219-14229

Released	2009-03-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	MS8

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3S2V \| pdb_00003s2v	Download File View File

Crystal Structure of the Ligand Binding Domain of GluK1 in Complex with an Antagonist (S)-1-(2'-Amino-2'-carboxyethyl)-3-[(2-carboxythien-3-yl)methyl]thieno[3,4-d]pyrimidin-2,4-dione at 2.5 A Resolution

Venskutonyte, R., Frydenvang, K., Kastrup, J.S.

(2011) J Med Chem 54: 4793-4805

Released	2011-06-22
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	3HU, CL, GOL, SO4

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3TDJ \| pdb_00003tdj	Download File View File

Crystal structure of the GluA2 ligand-binding domain (S1S2J-L483Y-N754S) in complex with glutamate and BPAM-97 at 1.95 A resolution

Krintel, C., Frydenvang, K., Gajhede, M., Kastrup, J.S.

(2012) Biochem J 441: 173-178

Released	2011-09-21
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 2 (protein)
Unique Ligands	3TJ, CL, GLU, GOL, SO4

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3TKD \| pdb_00003tkd	Download File View File

Crystal structure of the GluA2 ligand-binding domain (S1S2J-L483Y-N754S) in complex with glutamate and cyclothiazide at 1.45 A resolution

Krintel, C., Frydenvang, K., Gajhede, M., Kastrup, J.S.

(2012) Biochem J 441: 173-178

Released	2011-09-21
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Rattus norvegicus
Macromolecule	GLUTAMATE RECEPTOR 2 (protein)
Unique Ligands	CYZ, GLU, GOL, SO4

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4DLD \| pdb_00004dld	Download File View File

Crystal structure of the GluK1 ligand-binding domain (S1S2) in complex with the antagonist (S)-2-amino-3-(2-(2-carboxyethyl)-5-chloro-4-nitrophenyl)propionic acid at 2.0 A resolution

Venskutonyte, R., Frydenvang, K., Kastrup, J.S.

(2012) ChemMedChem 7: 1793-1798

Released	2012-10-10
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	CL, GOL, SO4, TZG

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4E0X \| pdb_00004e0x	Download File View File

Crystal structure of the kainate receptor GluK1 ligand-binding domain in complex with kainate in the absence of glycerol

Frydenvang, K., Kastrup, J.S.

(2012) Neurochem Int 61: 536-545

Released	2012-04-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	CL, KAI, SO4

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4IY5 \| pdb_00004iy5	Download File View File

Crystal structure of the glua2 ligand-binding domain (S1S2J-L483Y-N754S) in complex with glutamate and CX516 at 2.0 A resolution

Krintel, C., Frydenvang, K., Harpsoe, K., Gajhede, M., Kastrup, J.S.

(2013) Acta Crystallogr D Biol Crystallogr 69: 1645-1652

Released	2013-10-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 2 (protein)
Unique Ligands	CL, CX5, GLU, GOL, SO4

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4IY6 \| pdb_00004iy6	Download File View File

Crystal structure of the GLUA2 ligand-binding domain (S1S2J-L483Y-N754S) in complex with glutamate and ME-CX516 at 1.72 A resolution

Krintel, C., Frydenvang, K., Harpsoe, K., Gajhede, M., Kastrup, J.S.

(2013) Acta Crystallogr D Biol Crystallogr 69: 1645-1652

Released	2013-10-09
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 2 (protein)
Unique Ligands	GLU, GOL, MQR, MQS, SO4

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4U4S \| pdb_00004u4s	Download File View File

Crystal structure of the GluA2 ligand-binding domain (S1S2J-L483Y-N754S) in complex with glutamate and BPAM25 at 1.90 A resolution.

Noerholm, A.B., Deva, T., Frydenvang, K., Kastrup, J.S.

(2014) J Med Chem 57: 9539-9553

Released	2014-11-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 2,Glutamate receptor 2 (protein)
Unique Ligands	3C1, ACT, CL, GLU, GOL, PEG, SO4

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4U4X \| pdb_00004u4x	Download File View File

Crystal structure of the GluA2 ligand-binding domain (S1S2J-L483Y-N754S) in complex with glutamate and BPAM37 at 1.56 A resolution.

Noerholm, A.B., Frydenvang, K., Kastrup, J.S.

(2014) J Med Chem 57: 9539-9553

Released	2014-11-19
Method	X-RAY DIFFRACTION 1.56 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 2,Glutamate receptor 2 (protein)
Unique Ligands	3C2, ACT, GLU, GOL, PEG, SO4

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4YMB \| pdb_00004ymb	Download File View File

Structure of the ligand-binding domain of GluK1 in complex with the antagonist CNG10111

Moller, C., Tapken, D., Kastrup, J.S., Frydenvang, K.

(2015) J Med Chem 58: 6131-6150

Released	2015-08-05
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor ionotropic, kainate 1,Glutamate receptor ionotropic, kainate 1 (protein)
Unique Ligands	4E7, ACT, CL, EDO, PEG

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5CC2 \| pdb_00005cc2	Download File View File

STRUCTURE OF THE LIGAND-BINDING DOMAIN OF THE IONOTROPIC GLUTAMATE RECEPTOR-LIKE GLUD2 IN COMPLEX WITH 7-CKA

Naur, P., Gajhede, M., Kastrup, J.S.

(2016) Mol Pharmacol 89: 253-262

Released	2015-12-30
Method	X-RAY DIFFRACTION 2.501 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor ionotropic, delta-2 (protein)
Unique Ligands	CKA, CL, GOL

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5ELV \| pdb_00005elv	Download File View File

Crystal structure of the GluA2 ligand-binding domain (S1S2J-L504-N775) in complex with glutamate and BPAM-521 at 1.92 A resolution

Krintel, C., Juknaite, L., Frydenvang, K., Kastrup, J.S.

(2016) Biophys J 110: 2397-2406

Released	2016-05-04
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 2,Glutamate receptor 2 (protein)
Unique Ligands	5PX, ACT, CL, GLU, GOL, PEG, SO4

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5M2V \| pdb_00005m2v	Download File View File

Structure of GluK1 ligand-binding domain (S1S2) in complex with (2S,4R)-4-(2-carboxyphenoxy)pyrrolidine-2-carboxylic acid at 3.18 A resolution

Frydenvang, K., Kastrup, J.S., Kristensen, C.M.

(2017) J Med Chem 60: 441-457

Released	2017-01-11
Method	X-RAY DIFFRACTION 3.18 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor ionotropic, kainate 1,Glutamate receptor ionotropic, kainate 1 (protein)
Unique Ligands	7E5, CL, SO4

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5MFQ \| pdb_00005mfq	Download File View File

Crystal structure of the GluK1 ligand-binding domain in complex with kainate and BPAM-344 at 1.90 A resolution

Larsen, A.P., Frydenvang, K., Kastrup, J.S.

(2017) Mol Pharmacol 91: 576-585

Released	2017-04-12
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor ionotropic, kainate 1,Glutamate receptor ionotropic, kainate 1 (protein)
Unique Ligands	2J9, CL, GOL, KAI, SO4

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Symmetry Type

SCOP Classification

1VSO | pdb_00001vso

1YCJ | pdb_00001ycj

2ANJ | pdb_00002anj

2PBW | pdb_00002pbw

2V3T | pdb_00002v3t

2V3U | pdb_00002v3u

2WKY | pdb_00002wky

3FAS | pdb_00003fas

3FAT | pdb_00003fat

3GBA | pdb_00003gba

3GBB | pdb_00003gbb

3S2V | pdb_00003s2v

3TDJ | pdb_00003tdj

3TKD | pdb_00003tkd

4DLD | pdb_00004dld

4E0X | pdb_00004e0x

4IY5 | pdb_00004iy5

4IY6 | pdb_00004iy6

4U4S | pdb_00004u4s

4U4X | pdb_00004u4x

4YMB | pdb_00004ymb

5CC2 | pdb_00005cc2

5ELV | pdb_00005elv

5M2V | pdb_00005m2v

5MFQ | pdb_00005mfq