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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Phung, I."

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Search Summary

This query matches 14 Structures.

Refinements

Structure Determination Methodology

experimental (14)

Scientific Name of Source Organism

	Human immunodeficiency virus 1 (6)
	Homo sapiens (5)
	Macaca mulatta (5)
	Mus musculus (3)
	synthetic construct (2)
	Simiiformes sp. (1)

Taxonomy

	Eukaryota (13)
	Riboviria (6)
	other sequences (2)

Experimental Method

	ELECTRON MICROSCOPY (7)
	X-RAY DIFFRACTION (7)

Polymer Entity Type

Protein (14)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (1)
	2.5 - 3.0 (4)
	3.0 - 3.5 (6)
	3.5 - 4.0 (1)
	4.0 - 4.5 (1)

Release Date

	2020 - 2024 (12)
	2025 - 2029 (2)

Symmetry Type

	Asymmetric (8)
	Cyclic (6)

AllSelected

1 to 14 of 14 Structures

Page 1 of 1

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8SX3	Download File View File

10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10

Huang, J., Ozorowski, G., Ward, A.B.

(2024) Nat Immunol 25: 1073-1082

Released	2024-05-22
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Homo sapiens Mus musculus synthetic construct
Macromolecule	10E8 Fab heavy chain (protein) 10E8 light chain (protein) 10E8-GT10.2 immunogen (protein) W6-10 mouse Fab heavy chain (protein) W6-10 mouse light chain (protein)
Unique branched monosaccharides	NAG

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8T49	Download File View File

MD65 N332-GT5 SOSIP in complex with RM_N332_03 Fab and RM20A3 Fab

Ozorowski, G., Torres, J.L., Ward, A.B.

(2024) Science 384: eadj8321-eadj8321

Released	2024-05-08
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	Unique protein chains: 6
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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8T4A	Download File View File

MD65 N332-GT5 SOSIP in complex with RM_N332_36 Fab and RM20A3 Fab

Ozorowski, G., Torres, J.L., Ward, A.B.

(2024) Science 384: eadj8321-eadj8321

Released	2024-05-08
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	Unique protein chains: 6
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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8T4B	Download File View File

MD65 N332-GT5 SOSIP in complex with RM_N332_32 Fab and RM20A3

Ozorowski, G., Torres, J.L., Ward, A.B.

(2024) Science 384: eadj8321-eadj8321

Released	2024-05-08
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	Unique protein chains: 6
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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8T4D	Download File View File

MD65 N332-GT5 SOSIP in complex with RM_N332_08 Fab and RM20A3 Fab

Ozorowski, G., Torres, J.L., Ward, A.B.

(2024) Science 384: eadj8321-eadj8321

Released	2024-05-08
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	Unique protein chains: 6
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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8T4K	Download File View File

MD64 N332-GT5 SOSIP

Ozorowski, G., Torres, J.L., Ward, A.B.

(2024) Science 384: eadj8321-eadj8321

Released	2024-05-08
Method	ELECTRON MICROSCOPY 2.6 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	MD64 N332-GT5 SOSIP gp120 (protein) MD64 N332-GT5 SOSIP gp41 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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8T4L	Download File View File

MD65 N332-GT5 SOSIP in complex with RM_N332_07 Fab and RM20A3 Fab

Ozorowski, G., Torres, J.L., Ward, A.B.

(2024) Science 384: eadj8321-eadj8321

Released	2024-05-08
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	Unique protein chains: 6
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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8TZN	Download File View File

Crystal structure of 10E8-GT10.2 HIV-1 MPER scaffold in complex with a non-human primate W3-01 Fab

Lee, C.C.D., Wilson, I.A.

(2024) Nat Immunol 25: 1073-1082

Released	2024-06-12
Method	X-RAY DIFFRACTION 3.11 Å
Organisms	Simiiformes sp.
Macromolecule	10E8-GT10.2 MPER scaffold (protein) W3-01 Fab Heavy Chain (protein) W3-01 Fab Light Chain (protein)

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8TZW	Download File View File

Crystal structure of 10E8-GT4 scaffold in complex with a human 10E8 inferred germline (10E8-iGL1)

Irimia, A., Wilson, I.A.

(2024) Nat Immunol 25: 1073-1082

Released	2024-06-12
Method	X-RAY DIFFRACTION 2.66 Å
Organisms	Homo sapiens
Macromolecule	10E8-GT4 epitope scaffold (protein) 10E8-IGL1 Fab Light Chain (protein) 10E8-IGL1 Fab heavy chain (protein)

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8U03	Download File View File

Crystal structure of non-glycosylated 10E8-GT10.1 scaffold in complex with a human 10E8 NGS precursor (10E8-NGS-03)

Irimia, A., Wilson, I.A.

(2024) Nat Immunol 25: 1073-1082

Released	2024-06-12
Method	X-RAY DIFFRACTION 2.72 Å
Organisms	Homo sapiens
Macromolecule	10E8-GT10.1 epitope scaffold (protein) 10E8-NGS-03 Fab Light Chain (protein) 10E8-NGS-03 Fab heavy chain (protein)
Unique Ligands	1PE, IMD

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8U08	Download File View File

Crystal structure of 10E8-GT11 scaffold in complex with a human 10E8 inferred germline (10E8-iGL1)

Irimia, A., Wilson, I.A.

(2024) Nat Immunol 25: 1073-1082

Released	2024-06-12
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Homo sapiens
Macromolecule	10E8-GT11 epitope scaffold (protein) 10E8-IGL1 heavy chain (protein) 10E8-IGL1 light chain (protein)
Unique Ligands	GOL

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8V2E	Download File View File

Crystal structure of B055 scaffold boost immunogen in complex with a mature 10E8 Fab

Cho, S.Y., Wilson, I.A.

(2024) Nat Immunol 25: 1073-1082

Released	2024-06-12
Method	X-RAY DIFFRACTION 2.62 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	10E8 EPITOPE SCAFFOLD B055 (protein) Antibody 10E8 FAB HEAVY CHAIN (protein) Antibody 10E8 FAB LIGHT CHAIN (protein)
Unique Ligands	NAG

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9BDH	Download File View File

Crystal structure of HIV-1 MPER scaffold in complex with antibody Fab Ab45.1

Lee, C.C.D., Wilson, I.A.

(2024) Nat Immunol 25: 1083-1096

Released	2025-02-19
Method	X-RAY DIFFRACTION 3 Å
Organisms	Mus musculus
Macromolecule	Fab 45.1 Heavy Chain (protein) Fab 45.1 Light Chain (protein) GT10.2 (protein)
Unique branched monosaccharides	NAG

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9BDI	Download File View File

Crystal structure of HIV-1 MPER scaffold in complex with antibody Fab Ab45.2

Lee, C.C.D., Wilson, I.A.

(2024) Nat Immunol 25: 1083-1096

Released	2025-02-19
Method	X-RAY DIFFRACTION 2.07 Å
Organisms	Mus musculus
Macromolecule	Fab 45.2 Heavy Chain (protein) Fab 45.2 Light Chain (protein) GT10.2 glycan KO (protein)

1 to 14 of 14 Structures

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