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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Rindfleisch, S."

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Search Summary

This query matches 24 Structures.

Refinements

Structure Determination Methodology

experimental (24)

Scientific Name of Source Organism

Homo sapiens (24)

Taxonomy

Eukaryota (24)

Experimental Method

X-RAY DIFFRACTION (24)

Polymer Entity Type

Protein (24)

Refinement Resolution (Å)

	0.5 - 1.0 (5)
	1.0 - 1.5 (19)

Release Date

2020 - 2024 (24)

Enzyme Classification Name

	Lyases (24)
	Transferases (24)

Symmetry Type

	Cyclic (23)
	Asymmetric (1)

AllSelected

1 to 24 of 24 Structures

Page 1 of 1

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Explore in 3D

6YVK \| pdb_00006yvk	Download File View File

Human OMPD-domain of UMPS in complex with the substrate OMP at 1.25 Angstroms resolution, 0.71 MGy exposure

Tittmann, K., Rindfleisch, S., Krull, M.

(2022) Nat Catal 5: 332-341

Released	2021-11-17
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, OMP, SO4, U

Explore in 3D

6YVL \| pdb_00006yvl	Download File View File

Human OMPD-domain of UMPS in complex with the substrate OMP at 1.25 Angstroms resolution, 1.42 MGy exposure

Tittmann, K., Rindfleisch, S., Krull, M.

(2022) Nat Catal 5: 332-341

Released	2021-11-17
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, OMP, SO4, U

Explore in 3D

6YVM \| pdb_00006yvm	Download File View File

Human OMPD-domain of UMPS in complex with the substrate OMP at 1.25 Angstroms resolution, 2.13 MGy exposure

Tittmann, K., Rindfleisch, S., Krull, M.

(2022) Nat Catal 5: 332-341

Released	2021-11-17
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, OMP, SO4, U

Explore in 3D

6YVN \| pdb_00006yvn	Download File View File

Human OMPD-domain of UMPS in complex with the substrate OMP at 1.25 Angstroms resolution, 2.84 MGy exposure

Tittmann, K., Rindfleisch, S., Krull, M.

(2022) Nat Catal 5: 332-341

Released	2021-11-17
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, OMP, SO4, U

Explore in 3D

6YVO \| pdb_00006yvo	Download File View File

Human OMPD-domain of UMPS in complex with the substrate OMP at 1.25 Angstroms resolution, 3.55 MGy exposure

Tittmann, K., Rindfleisch, S., Krull, M.

(2022) Nat Catal 5: 332-341

Released	2022-02-23
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, OMP, SO4, U

Explore in 3D

6YWT \| pdb_00006ywt	Download File View File

Human OMPD-domain of UMPS (K314AcK) in complex with 6-hydroxy-UMP at 1.05 Angstroms resolution

Tittmann, K., Rindfleisch, S., Krull, M.

(2022) Nat Catal 5: 332-341

Released	2022-02-23
Method	X-RAY DIFFRACTION 1.05 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	BMP, PRO

Explore in 3D

6YWU \| pdb_00006ywu	Download File View File

Human OMPD-domain of UMPS (K314AcK) in complex with UMP at 1.1 Angstroms resolution

Tittmann, K., Rindfleisch, S., Krull, M.

(2022) Nat Catal 5: 332-341

Released	2022-02-23
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, SO4, U5P

Explore in 3D

6ZWY \| pdb_00006zwy	Download File View File

OMPD-domain of human UMPS in complex with UMP at 1.0 Angstroms resolution

Tittmann, K., Rindfleisch, S.

(2022) Nat Catal 5: 332-341

Released	2022-02-23
Method	X-RAY DIFFRACTION 1 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, PRO, U5P

Explore in 3D

6ZWZ \| pdb_00006zwz	Download File View File

Resting state structure of the OMPD-domain of human UMPS variant (K314AcK) at 1.2 Angstroms resolution

Tittmann, K., Rindfleisch, S., Krull, M.

(2022) Nat Catal 5: 332-341

Released	2022-02-23
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	SO4

Explore in 3D

6ZX0 \| pdb_00006zx0	Download File View File

OMPD-domain of human UMPS in complex with the substrate OMP at 1.25 Angstroms resolution

Tittmann, K., Rindfleisch, S., Krull, M.

(2022) Nat Catal 5: 332-341

Released	2022-02-23
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, OMP, SO4, U

Explore in 3D

6ZX1 \| pdb_00006zx1	Download File View File

OMPD-domain of human UMPS in complex with 6-Aza-UMP at 1.0 Angstroms resolution

Tittmann, K., Rindfleisch, S., Krull, M.

(2022) Nat Catal 5: 332-341

Released	2022-02-23
Method	X-RAY DIFFRACTION 1 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	PRO, SO4, UP6

Explore in 3D

6ZX2 \| pdb_00006zx2	Download File View File

OMPD-domain of human UMPS in complex with 6-carboxamido-UMP at 1.2 Angstroms resolution

Tittmann, K., Rindfleisch, S., Schimdt, T.

(2022) Nat Catal 5: 332-341

Released	2022-02-23
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	PRO, QRT, SO4

Explore in 3D

6ZX3 \| pdb_00006zx3	Download File View File

OMPD-domain of human UMPS in complex with 6-thiocarboxamido-UMP at 1.15 Angstroms resolution

Tittmann, K., Rindfleisch, S., Schimdt, T.

(2022) Nat Catal 5: 332-341

Released	2022-02-23
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, PRO, QRZ, SO4

Explore in 3D

7AM9 \| pdb_00007am9	Download File View File

OMPD-domain of human UMPS in complex with the substrate OMP at 0.99 Angstroms resolution

Tittmann, K., Rindfleisch, S., Krull, M.

(2022) Nat Catal 5: 332-341

Released	2021-11-03
Method	X-RAY DIFFRACTION 0.99 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, OMP, SO4, U

Explore in 3D

7ASQ \| pdb_00007asq	Download File View File

Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex with the reaction product UMP at 0.95 Angstrom resolution

Rindfleisch, S., Rabe von Pappenheim, F.

(2022) Nat Catal 5: 332-341

Released	2021-11-24
Method	X-RAY DIFFRACTION 0.95 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, NA, SO4, U5P

Explore in 3D

7OQF \| pdb_00007oqf	Download File View File

Human OMPD-domain of UMPS in complex with OMP at 1.05 Angstrom resolution, 5 minutes soaking

Rindfleisch, S., Rabe von Pappenheim, F., Tittmann, K.

(2022) Nat Catal 5: 332-341

Released	2022-04-13
Method	X-RAY DIFFRACTION 1.05 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, OMP, SO4, U

Explore in 3D

7OQI \| pdb_00007oqi	Download File View File

Human OMPD-domain of UMPS in complex with substrate OMP at 1.15 Angstrom resolution, 10 minutes soaking

Rindfleisch, S., Rabe von Pappenheim, F., Tittmann, K.

(2022) Nat Catal 5: 332-341

Released	2022-04-13
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, OMP, SO4, U

Explore in 3D

7OQK \| pdb_00007oqk	Download File View File

Human OMPD-domain of UMPS in complex with substrate OMP at 1.10 Angstroms resolution, 15 minutes soaking

Rindfleisch, S., Rabe von Pappenheim, F., Tittmann, K.

(2022) Nat Catal 5: 332-341

Released	2022-04-13
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, OMP, SO4, U

Explore in 3D

7OQM \| pdb_00007oqm	Download File View File

Human OMPD-domain of UMPS in complex with substrate OMP at 1.05 Angstroms resolution, 20 minutes soaking

Rindfleisch, S., Rabe von Pappenheim, F., Tittmann, K.

(2022) Nat Catal 5: 332-341

Released	2022-04-13
Method	X-RAY DIFFRACTION 1.05 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, OMP, SO4, U

Explore in 3D

7OQN \| pdb_00007oqn	Download File View File

Human OMPD-domain of UMPS in complex with substrate OMP at 1.10 Angstroms resolution, 30 minutes soaking

Rindfleisch, S., Rabe von Pappenheim, F., Tittmann, K.

(2022) Nat Catal 5: 332-341

Released	2022-04-13
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, SO4, U

Explore in 3D

7OTU \| pdb_00007otu	Download File View File

Human OMPD-domain of UMPS in complex with 6-hydroxy-UMP at 0.95 Angstroms resolution, crystal 2

Rindfleisch, S., Rabe von Pappenheim, F., Tittmann, K.

(2022) Nat Catal 5: 332-341

Released	2022-04-20
Method	X-RAY DIFFRACTION 0.95 Å
Organisms	Homo sapiens
Macromolecule	Isoform 2 of Uridine 5'-monophosphate synthase (protein)
Unique Ligands	BMP, GOL

Explore in 3D

7OUZ \| pdb_00007ouz	Download File View File

Human OMPD-domain of UMPS in complex with 6-hydroxy-UMP at 0.9 Angstroms resolution, crystal 1

Rindfleisch, S., Tittmann, K.

(2022) Nat Catal 5: 332-341

Released	2022-04-20
Method	X-RAY DIFFRACTION 0.9 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	BMP, GOL, PRO

Explore in 3D

7OV0 \| pdb_00007ov0	Download File View File

Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in resting state at 0.95 Angstrom resolution

Rindfleisch, S., Rabe von Pappenheim, F.

(2022) Nat Catal 5: 332-341

Released	2022-04-20
Method	X-RAY DIFFRACTION 0.95 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, PRO, SO4

Explore in 3D

7Q1H \| pdb_00007q1h	Download File View File

Variant D312N of Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex with the substrate OMP at 1.31 Angstrom resolution

Rabe von Pappenheim, F., Kirck, L.L.

(2022) Nat Catal 5: 332-341

Released	2022-05-04
Method	X-RAY DIFFRACTION 1.31 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	OMP, PRO, SO4

1 to 24 of 24 Structures

Page 1 of 1

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

6YVK | pdb_00006yvk

6YVL | pdb_00006yvl

6YVM | pdb_00006yvm

6YVN | pdb_00006yvn

6YVO | pdb_00006yvo

6YWT | pdb_00006ywt

6YWU | pdb_00006ywu

6ZWY | pdb_00006zwy

6ZWZ | pdb_00006zwz

6ZX0 | pdb_00006zx0

6ZX1 | pdb_00006zx1

6ZX2 | pdb_00006zx2

6ZX3 | pdb_00006zx3

7AM9 | pdb_00007am9

7ASQ | pdb_00007asq

7OQF | pdb_00007oqf

7OQI | pdb_00007oqi

7OQK | pdb_00007oqk

7OQM | pdb_00007oqm

7OQN | pdb_00007oqn

7OTU | pdb_00007otu

7OUZ | pdb_00007ouz

7OV0 | pdb_00007ov0

7Q1H | pdb_00007q1h