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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Saha, S."

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Search Summary

This query matches 86 Structures.

Refinements

Structure Determination Methodology

experimental (86)

Scientific Name of Source Organism

	Homo sapiens (57)
	Mus musculus (41)
	Pyrococcus horikoshii OT3 (12)
	Bos taurus (9)
	Rattus norvegicus (7)
	Human immunodeficiency virus 1 (6)
	Chitinophaga pinensis DSM 2588 (5)
	Macaca mulatta (5)
	synthetic construct (3)
	Arabidopsis thaliana (2)

More...

Taxonomy

	Eukaryota (66)
	Archaea (12)
	Bacteria (7)
	Riboviria (6)
	other sequences (3)

Experimental Method

	ELECTRON MICROSCOPY (58)
	X-RAY DIFFRACTION (27)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (86)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (5)
	2.0 - 2.5 (6)
	2.5 - 3.0 (15)
	3.0 - 3.5 (40)
	3.5 - 4.0 (12)
	4.0 - 4.5 (5)
	> 4.5 (1)

Release Date

	2000 - 2004 (1)
	2010 - 2014 (2)
	2015 - 2019 (2)
	2020 - 2024 (62)
	2025 - 2029 (19)

Enzyme Classification Name

	Hydrolases (25)
	Transferases (17)

Membrane Protein Annotation

	PDBTM (31)
	MemProtMD (12)
	mpstruc (9)

Symmetry Type

	Asymmetric (58)
	Cyclic (27)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (2)
	Small proteins (1)

AllSelected

1 to 25 of 86 Structures

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1HJ7	Download File View File

NMR study of a pair of LDL receptor Ca2+ binding epidermal growth factor-like domains, 20 structures

Saha, S., Handford, P.A., Campbell, I.D., Downing, A.K.

(2001) Structure 9: 451

Released	2001-07-11
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	LDL RECEPTOR (protein)
Unique Ligands	CA

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2YBO	Download File View File

The x-ray structure of the SAM-dependent uroporphyrinogen III methyltransferase NirE from Pseudomonas aeruginosa in complex with SAH

Storbeck, S., Saha, S., Krausze, J., Klink, B.U., Heinz, D.W., Layer, G.

(2011) J Biol Chem 286: 26754

Released	2011-06-01
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	METHYLTRANSFERASE (protein)
Unique Ligands	SAH

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2YBQ	Download File View File

The x-ray structure of the SAM-dependent uroporphyrinogen III methyltransferase NirE from Pseudomonas aeruginosa in complex with SAH and uroporphyrinogen III

Storbeck, S., Saha, S., Krausze, J., Klink, B.U., Heinz, D.W., Layer, G.

(2011) J Biol Chem 286: 26754

Released	2011-06-01
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	METHYLTRANSFERASE (protein)
Unique Ligands	SAH, UP2

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5G2R	Download File View File

Crystal structure of the Mo-insertase domain Cnx1E from Arabidopsis thaliana

Krausze, J., Saha, S., Probst, C., Kruse, T., Heinz, D.W., Mendel, R.R.

(2017) Biochem J 474: 163

Released	2017-02-15
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Arabidopsis thaliana
Macromolecule	MOLYBDOPTERIN BIOSYNTHESIS PROTEIN CNX1 (protein)
Unique Ligands	GOL, MG, SO4

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5G2S	Download File View File

Crystal structure of the Mo-insertase domain Cnx1E from Arabidopsis thaliana in complex with molybdate

Krausze, J., Probst, C., Kruse, T., Heinz, D.W., Mendel, R.R.

(2017) Biochem J 474: 163

Released	2017-02-15
Method	X-RAY DIFFRACTION 2.838 Å
Organisms	Arabidopsis thaliana
Macromolecule	MOLYBDOPTERIN BIOSYNTHESIS PROTEIN CNX1 (protein)
Unique Ligands	GOL, MG, MOO

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7URY	Download File View File

Tetradecameric hub domain of CaMKII beta

Ozden, C., Saha, S., Samkutty, A., Stratton, M.M., Garman, S.C., Perry, S.L.

(2023) Lab Chip 23: 2075-2090

Released	2022-05-11
Method	X-RAY DIFFRACTION 2.64 Å
Organisms	Homo sapiens
Macromolecule	Calcium/calmodulin-dependent protein kinase type II subunit beta (protein)
Unique Ligands	MLT

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7ZOH	Download File View File

Carbohydrate binding domain CBM92-B from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588

Mazurkewich, S., McKee, L.S., Lu, Z., Branden, G., Larsbrink, J.

(2024) Nat Commun 15: 3429-3429

Released	2023-05-10
Method	X-RAY DIFFRACTION 1.56 Å
Organisms	Chitinophaga pinensis DSM 2588
Macromolecule	Glycoside hydrolase family 18 (protein)

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7ZOI	Download File View File

Carbohydrate binding domain CBM92-A from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588

Mazurkewich, S., McKee, L.S., Lu, Z., Branden, G., Larsbrink, J.

(2024) Nat Commun 15: 3429-3429

Released	2023-05-10
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Chitinophaga pinensis DSM 2588
Macromolecule	Glycoside hydrolase family 18 (protein)

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7ZON	Download File View File

Carbohydrate binding domain CBM92-B from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588 in complex with glucose

Mazurkewich, S., McKee, L.S., Lu, Z., Branden, G., Larsbrink, J.

(2024) Nat Commun 15: 3429-3429

Released	2023-05-10
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Chitinophaga pinensis DSM 2588
Macromolecule	Glycoside hydrolase family 18 (protein)
Unique Ligands	1PE, BGC

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7ZOO	Download File View File

Carbohydrate binding domain CBM92-B from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588 in complex with gentiobiose

Mazurkewich, S., McKee, L.S., Lu, Z., Branden, G., Larsbrink, J.

(2024) Nat Commun 15: 3429-3429

Released	2023-05-10
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Chitinophaga pinensis DSM 2588
Macromolecule	Glycoside hydrolase family 18 (protein)
Unique Ligands	BGC

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7ZOP	Download File View File

Carbohydrate binding domain CBM92-B from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588 in complex with sophorose.

Mazurkewich, S., McKee, L.S., Lu, Z., Branden, G., Larsbrink, J.

(2024) Nat Commun 15: 3429-3429

Released	2023-05-10
Method	X-RAY DIFFRACTION 1.68 Å
Organisms	Chitinophaga pinensis DSM 2588
Macromolecule	Glycoside hydrolase family 18 (protein)
Unique Ligands	BGC

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8GO8	Download File View File

Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1

Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.

(2023) Mol Cell 83: 2091-2107.e7

Released	2023-05-17
Method	ELECTRON MICROSCOPY 3.41 Å
Organisms	Homo sapiens Mus musculus Rattus norvegicus
Macromolecule	Beta-arrestin-1 (protein) C5a anaphylatoxin chemotactic receptor 1 (protein) Fab30 heavy chain (protein) Fab30 light chain (protein)

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8GO9	Download File View File

Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human Atypical chemokine receptor 2, ACKR2 (D6R)

Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.

(2024) Science 383: 101-108

Released	2023-12-27
Method	ELECTRON MICROSCOPY 3.35 Å
Organisms	Bos taurus Homo sapiens Mus musculus
Macromolecule	Atypical chemokine receptor 2 (protein) Beta-arrestin-2 (protein) Fab30 Heavy Chain (protein) Fab30 Light Chain (protein)

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8GOC	Download File View File

Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human Vasopressin V2 receptor, V2R

Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.

(2023) Mol Cell 83: 2091-2107.e7

Released	2023-05-17
Method	ELECTRON MICROSCOPY 4.18 Å
Organisms	Bos taurus Homo sapiens Mus musculus
Macromolecule	Beta-arrestin-2 (protein) Fab30 Heavy Chain (protein) Fab30 Light Chain (protein) Vasopressin V2 receptor (protein)

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8GOO	Download File View File

Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1

Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.

(2023) Mol Cell 83: 2091-2107.e7

Released	2023-05-17
Method	ELECTRON MICROSCOPY 4.4 Å
Organisms	Bos taurus Homo sapiens Mus musculus
Macromolecule	Beta-arrestin-2 (protein) C5a anaphylatoxin chemotactic receptor 1 (protein) Fab30 Heavy Chain (protein) Fab30 Light Chain (protein)

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8GP3	Download File View File

Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C-X-C chemokine receptor type 4, CXCR4

Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.

(2023) Mol Cell 83: 2091-2107.e7

Released	2023-05-17
Method	ELECTRON MICROSCOPY 4.8 Å
Organisms	Homo sapiens Mus musculus Rattus norvegicus
Macromolecule	Beta-arrestin-1 (protein) C-X-C chemokine receptor type 4 (protein) Fab30 Heavy Chain (protein) Fab30 Light Chain (protein)

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8HPT	Download File View File

Structure of C5a-pep bound mouse C5aR1 in complex with Go

Saha, S., Maharana, J., Yadav, M.K., Sarma, P., Chami, M., Banerjee, R., Shukla, A.K.

(2023) Cell 186: 4956-4973.e21

Released	2023-10-18
Method	ELECTRON MICROSCOPY 3.39 Å
Organisms	Homo sapiens Mus musculus synthetic construct
Macromolecule	Unique protein chains: 6

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8HQC	Download File View File

Structure of a GPCR-G protein in complex with a natural peptide agonist

Saha, S., Maharana, J., Yadav, M.K., Sarma, P., Chami, M., Banerjee, R., Shukla, A.K.

(2023) Cell 186: 4956-4973.e21

Released	2023-10-18
Method	ELECTRON MICROSCOPY 3.89 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Unique protein chains: 6

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8I0N	Download File View File

Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1 (Local refine)

Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.

(2023) Mol Cell 83: 2091-2107.e7

Released	2023-05-17
Method	ELECTRON MICROSCOPY 3.26 Å
Organisms	Homo sapiens Mus musculus Rattus norvegicus
Macromolecule	Beta-arrestin-1 (protein) C5a anaphylatoxin chemotactic receptor 1 (protein) Fab30 heavy chain (protein) Fab30 light chain (protein)

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8I0Q	Download File View File

Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C-X-C chemokine receptor type 4, CXCR4 (Local refine)

Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.

(2023) Mol Cell 83: 2091-2107.e7

Released	2023-05-17
Method	ELECTRON MICROSCOPY 4.45 Å
Organisms	Homo sapiens Mus musculus Rattus norvegicus
Macromolecule	Beta-arrestin-1 (protein) C-X-C chemokine receptor type 4 (protein) Fab30 Heavy Chain (protein) Fab30 Light Chain (protein)

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8I0Z	Download File View File

Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1 (Local refine)

Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.

(2023) Mol Cell 83: 2091-2107.e7

Released	2023-05-17
Method	ELECTRON MICROSCOPY 4.33 Å
Organisms	Bos taurus Homo sapiens Mus musculus
Macromolecule	Beta-arrestin-2 (protein) C5a anaphylatoxin chemotactic receptor 1 (protein) Fab30 Heavy Chain (protein) Fab30 Light Chain (protein)

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8I10	Download File View File

Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human Vasopressin V2 receptor, V2R (Local refine)

Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.

(2023) Mol Cell 83: 2091-2107.e7

Released	2023-05-17
Method	ELECTRON MICROSCOPY 3.96 Å
Organisms	Bos taurus Homo sapiens Mus musculus
Macromolecule	Beta-arrestin-2 (protein) Fab30 Heavy Chain (protein) Fab30 Light Chain (protein) Vasopressin V2 receptor (protein)

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8I95	Download File View File

Structure of EP54-C3aR-Go complex

Yadav, M.K., Yadav, R., Maharana, J., Sarma, P., Banerjee, R., Shukla, A.K., Gati, C.

(2023) Cell 186: 4956-4973.e21

Released	2023-10-18
Method	ELECTRON MICROSCOPY 2.88 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Unique protein chains: 6

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8I97	Download File View File

Structure of Apo-C3aR-Go complex (Glacios)

Yadav, M.K., Yadav, R., Maharana, J., Sarma, P., Banerjee, R., Shukla, A.K., Gati, C.

(2023) Cell 186: 4956-4973.e21

Released	2023-10-18
Method	ELECTRON MICROSCOPY 3.19 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Antibody fragment - ScFv16 (protein) C3a anaphylatoxin chemotactic receptor (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(o) subunit alpha (protein)

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8I9A	Download File View File

Structure of EP54-C3aR-Gq complex

Yadav, M.K., Yadav, R., Maharana, J., Sarma, P., Banerjee, R., Shukla, A.K., Gati, C.

(2023) Cell 186: 4956-4973.e21

Released	2023-10-18
Method	ELECTRON MICROSCOPY 3.57 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Unique protein chains: 6

1 to 25 of 86 Structures

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