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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: BIRD Name HAS EXACT PHRASE "=N-cyclooctylglycyl-N-(4-carbamimidoylbenzyl)-L-prolinamide"

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Search Summary

This query matches 2 Structures.

Refinements

Structure Determination Methodology

experimental (2)

Scientific Name of Source Organism

	Bos taurus (1)
	Hirudo medicinalis (1)
	Homo sapiens (1)

Taxonomy

Eukaryota (2)

Experimental Method

X-RAY DIFFRACTION (2)

Polymer Entity Type

Protein (2)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	2.0 - 2.5 (1)

Release Date

2005 - 2009 (2)

Enzyme Classification Name

Hydrolases (2)

Symmetry Type

Asymmetric (2)

SCOP Classification

All beta proteins (1)

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Explore in 3D

2ZHE	Download File View File

Exploring thrombin S3 pocket

Brandt, T., Baum, B., Heine, A., Klebe, G.

To be published

Released	2009-02-10
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin heavy chain (protein) Thrombin light chain (protein)
Unique Ligands	13U, NA

Explore in 3D

2ZQ2	Download File View File

Exploring trypsin S3 pocket

Brandt, T., Baum, B., Heine, A., Klebe, G.

(2011) J Mol Biol 405: 1170-1187

Released	2009-08-04
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Bos taurus
Macromolecule	Cationic trypsin (protein)
Unique Ligands	13U, CA, GOL

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2ZHE

Exploring thrombin S3 pocket

2ZQ2

Exploring trypsin S3 pocket