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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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Search Summary

This query matches 18 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (18)

Scientific Name of Source Organism

	Escherichia coli K-12 (6)
	Mus musculus (3)
	Bacillus amyloliquefaciens (2)
	Bos taurus (1)
	Escherichia coli (1)
	Fusarium oxysporum (1)
	Homo sapiens (1)
	Solanum cardiophyllum (1)
	Tetronarce californica (1)
	Thermococcus kodakarensis KOD1 (1)

Taxonomy

	Bacteria (9)
	Eukaryota (8)
	Archaea (1)

Experimental Method

X-RAY DIFFRACTION (18)

Polymer Entity Type

Protein (18)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (3)
	2.0 - 2.5 (6)
	2.5 - 3.0 (5)
	3.0 - 3.5 (2)

Release Date

	1995 - 1999 (3)
	2000 - 2004 (2)
	2005 - 2009 (8)
	2010 - 2014 (2)
	2015 - 2019 (2)
	2020 - 2024 (1)

Enzyme Classification Name

Hydrolases (18)

Symmetry Type

	Cyclic (12)
	Asymmetric (7)

SCOP Classification

	All beta proteins (4)
	Alpha and beta proteins (a/b) (8)
	Artifacts (2)

AllSelected

1 to 18 of 18 Polymer Entities

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1A2Q: Entity 1	Download File View File

SUBTILISIN BPN' MUTANT 7186

Gilliland, G.L., Whitlow, M., Howard, A.J.

(1989) Biochemistry 28: 7205-7213

Released	1998-04-29
Method	X-RAY DIFFRACTION 1.8 Å
Chain ID	A
Organism	Bacillus amyloliquefaciens
Macromolecule	SUBTILISIN BPN'

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1GNV: Entity 1	Download File View File

CALCIUM INDEPENDENT SUBTILISIN BPN' MUTANT

Almog, O., Gilliland, G.L.

(2002) J Biol Chem 277: 27553

Released	2002-06-24
Method	X-RAY DIFFRACTION 1.9 Å
Chain ID	A
Organism	Bacillus amyloliquefaciens
Macromolecule	SUBTILISIN BPN'

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1PPZ: Entity 1	Download File View File

Trypsin complexes at atomic and ultra-high resolution

Schmidt, A., Jelsch, C., Rypniewski, W., Lamzin, V.S.

(2003) J Biol Chem 278: 43357-43362

Released	2003-11-11
Method	X-RAY DIFFRACTION 1.23 Å
Chain ID	A
Organism	Fusarium oxysporum
Macromolecule	Trypsin

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2DFP: Entity 1	Download File View File

X-RAY STRUCTURE OF AGED DI-ISOPROPYL-PHOSPHORO-FLUORIDATE (DFP) BOUND TO ACETYLCHOLINESTERASE

Kryger, G., Millard, C.B., Silman, I., Sussman, J.L.

(1999) Biochemistry 38: 7032-7039

Released	1999-06-28
Method	X-RAY DIFFRACTION 2.3 Å
Chain ID	A
Organism	Tetronarce californica
Macromolecule	PROTEIN (ACETYLCHOLINESTERASE)

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2JGM: Entity 1	Download File View File

Crystal structure of mouse acetylcholinesterase inhibited by aged diisopropyl fluorophosphate (DFP)

Hornberg, A., Tunemalm, A.-K., Ekstrom, F.

(2007) Biochemistry 46: 4815

Released	2007-04-17
Method	X-RAY DIFFRACTION 2.9 Å
Chain IDs	A, B
Organism	Mus musculus
Macromolecule	ACETYLCHOLINESTERASE

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2RCE: Entity 1	Download File View File

DFP modified DegS delta PDZ

Sohn, J., Grant, R.A., Sauer, R.T.

To be published

Released	2007-12-11
Method	X-RAY DIFFRACTION 2.35 Å
Chain IDs	A, B, C, D, E More (9)
Organism	Escherichia coli
Macromolecule	Protease degS

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2Z2X: Entity 1	Download File View File

Crystal structure of mature form of Tk-subtilisin

Tanaka, S., Matsumura, H., Koga, Y., Takano, K., Kanaya, S.

(2007) J Mol Biol 372: 1055-1069

Released	2007-12-04
Method	X-RAY DIFFRACTION 1.7 Å
Chain ID	A
Organism	Thermococcus kodakarensis KOD1
Macromolecule	Tk-subtilisin

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3GCN: Entity 1	Download File View File

Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with OMP peptide (YQF)

Sohn, J., Sauer, R.T., Grant, R.A.

To be published

Released	2009-03-31
Method	X-RAY DIFFRACTION 3.002 Å
Chain ID	A
Organism	Escherichia coli K-12
Macromolecule	Protease degS

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3GCO: Entity 1	Download File View File

Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with DNRDGNVYQF OMP peptide

Sohn, J., Grant, R.A., Sauer, R.T.

(2009) Structure 17: 1411-1421

Released	2009-03-31
Method	X-RAY DIFFRACTION 2.798 Å
Chain ID	A
Organism	Escherichia coli K-12
Macromolecule	Protease degS

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3GDS: Entity 1	Download File View File

Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with DNRDGNVYYF peptide

Sohn, J., Grant, R.A., Sauer, R.T.

(2009) Structure 17: 1411-1421

Released	2009-03-31
Method	X-RAY DIFFRACTION 2.85 Å
Chain ID	A
Organism	Escherichia coli K-12
Macromolecule	Protease degS

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3GDU: Entity 1	Download File View File

Crystal structure of DegS H198P/D320A mutant modified by DFP and in complex with YRF peptide

Sohn, J., Grant, R.A., Sauer, R.T.

(2009) Structure 17: 1411-1421

Released	2009-03-31
Method	X-RAY DIFFRACTION 3 Å
Chain IDs	A, B, C
Organism	Escherichia coli K-12
Macromolecule	DegS protease

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3GDV: Entity 1	Download File View File

Crystal structure of DegS H198P/D320A mutant modified by DFP and in complex with YQF peptide

Sohn, J., Grant, R.A., Sauer, R.T.

(2009) Structure 17: 1411-1421

Released	2009-03-31
Method	X-RAY DIFFRACTION 2.489 Å
Chain IDs	A, B, C
Organism	Escherichia coli K-12
Macromolecule	DegS protease

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3LH3: Entity 1	Download File View File

DFP modified DegS delta PDZ

Sohn, J., Grant, R.A., Sauer, R.T.

(2010) J Biol Chem 285: 34039-34047

Released	2010-08-25
Method	X-RAY DIFFRACTION 2.35 Å
Chain IDs	A, B, C, D, E More (9)
Organism	Escherichia coli K-12
Macromolecule	Protease degS

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4PKA: Entity 1	Download File View File

Crystal structure of patatin aged with diisopropylphosphorofluoridate

Wijeyesakere, S.J., Richardson, R.J., Stuckey, J.A.

(2014) PLoS One 9: e108245-e108245

Released	2014-10-01
Method	X-RAY DIFFRACTION 2.6 Å
Chain ID	A [auth X]
Organism	Solanum cardiophyllum
Macromolecule	Patatin-17

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5DTJ: Entity 1	Download File View File

Crystal Structure of dfp-inhibited mouse acetylcholinesterase in complex with the reactivator SP-134

Tran, T.H., Tong, L.

(2015) Chembiochem 16: 2205-2215

Released	2015-10-21
Method	X-RAY DIFFRACTION 2.71 Å
Chain IDs	A, B
Organism	Mus musculus
Macromolecule	Acetylcholinesterase

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5HCU: Entity 1	Download File View File

Crystal structure of mouse acetylchoinesterase inhibited by DFP

Tran, T.H., Tong, L.

(2015) Chembiochem 16: 2205-2215

Released	2016-01-20
Method	X-RAY DIFFRACTION 2.4151 Å
Chain IDs	A, B
Organism	Mus musculus
Macromolecule	Acetylcholinesterase

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5PTP: Entity 1	Download File View File

STRUCTURE OF HYDROLASE (SERINE PROTEINASE)

Stroud, R.M., Finer-Moore, J.

(1992) Proteins 12: 203-222

Released	1997-07-07
Method	X-RAY DIFFRACTION 1.34 Å
Chain ID	A
Organism	Bos taurus
Macromolecule	BETA TRYPSIN

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6WIA: Entity 1	Download File View File

CRYSTAL STRUCTURE OF HUMAN PROTECTIVE PROTEIN/CATHEPSIN A, DFP-INHIBITED (AGED)

Compton, J.R., Legler, P.M.

(2020) Biochem Pharmacol 177: 113980-113980

Released	2020-04-29
Method	X-RAY DIFFRACTION 2.21 Å
Chain ID	A
Organism	Homo sapiens
Macromolecule	Lysosomal protective protein

1 to 18 of 18 Polymer Entities

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