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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "MNPEP"

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Search Summary

This query matches 27 Structures.

Refinements

Structure Determination Methodology

experimental (27)

Scientific Name of Source Organism

Homo sapiens (27)

Taxonomy

Eukaryota (27)

Experimental Method

	X-RAY DIFFRACTION (25)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

	Protein (27)
	RNA (2)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (16)
	2.0 - 2.5 (7)
	2.5 - 3.0 (3)

Release Date

	2005 - 2009 (5)
	2015 - 2019 (14)
	2020 - 2024 (8)

Enzyme Classification Name

	Hydrolases (27)
	Transferases (1)

Symmetry Type

Asymmetric (27)

SCOP Classification

	All alpha proteins (5)
	Alpha and beta proteins (a+b) (5)

AllSelected

1 to 25 of 27 Structures

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1YW7 \| pdb_00001yw7	Download File View File

h-MetAP2 complexed with A444148

Park, C.H.

(2006) J Med Chem 49: 3832-3849

Released	2006-02-21
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	A41, MN

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1YW8 \| pdb_00001yw8	Download File View File

h-MetAP2 complexed with A751277

Park, C.H.

(2006) J Med Chem 49: 3832-3849

Released	2006-02-21
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	A75, MN

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1YW9 \| pdb_00001yw9	Download File View File

h-MetAP2 complexed with A849519

Park, C.H.

(2006) J Med Chem 49: 3832-3849

Released	2006-02-21
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	A84, MN

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2ADU \| pdb_00002adu	Download File View File

Human Methionine Aminopeptidase Complex with 4-Aryl-1,2,3-triazole Inhibitor

Kallander, L.S., Lu, Q., Chen, W., Tomaszek, T., Yang, G., Tew, D., Meek, T.D., Hofmann, G.A., Schulz-Pritchard, C.K., Smith, W.W., Janson, C.A., Ryan, M.D., Zhang, G.F., Johanson, K.O., Kirkpatrick, R.B., Ho, T.F., Fisher, P.W., Mattern, M.R., Johnson, R.K., Hansbury, M.J., Winkler, J.D., Ward, K.W., Veber, D.F., Thompson, S.K.

(2005) J Med Chem 48: 5644-5647

Released	2005-09-13
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	CO, R20

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2GA2 \| pdb_00002ga2	Download File View File

h-MetAP2 complexed with A193400

Park, C.

(2006) Bioorg Med Chem Lett 16: 3574-3577

Released	2007-03-13
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	A19, MN

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5CLS \| pdb_00005cls	Download File View File

Structure of human methionine aminopeptidase-2 complexed with spiroepoxytriazole inhibitor (+)-31a

Janowski, R., Miller, A.K., Niessing, D.

(2016) ACS Chem Biol 11: 1001-1011

Released	2016-01-13
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	52T, CIT, CL, CO, DMS, GOL

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5D6E \| pdb_00005d6e	Download File View File

Structure of human methionine aminopeptidase 2 with covalent spiroepoxytriazole inhibitor (-)-31b

Janowski, R., Miller, A.K., Niessing, D.

(2016) ACS Chem Biol 11: 1001-1011

Released	2016-01-13
Method	X-RAY DIFFRACTION 1.49 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	94A, CO, TBU

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5D6F \| pdb_00005d6f	Download File View File

Structure of human methionine aminopeptidase-2 complexed with spiroepoxytriazole inhibitor (+)-31b

Janowski, R., Miller, A.K., Niessing, D.

(2016) ACS Chem Biol 11: 1001-1011

Released	2016-01-13
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	57R, CO, EDO, TBU

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5JFR \| pdb_00005jfr	Download File View File

Potent, Reversible MetAP2 Inhibitors via Fragment Based Drug Discovery

Dougan, D.R., Lawson, J.D.

(2016) Bioorg Med Chem Lett 26: 2779-2783

Released	2016-05-25
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	6KP, DMS, EDO, MN

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5JHU \| pdb_00005jhu	Download File View File

Potent, Reversible MetAP2 Inhibitors via FBDD

Dougan, D.R.

(2016) Bioorg Med Chem Lett 26: 2774-2778

Released	2016-05-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	6KO, DMS, GOL, MN

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5JI6 \| pdb_00005ji6	Download File View File

Potent, Reversible MetAP2 Inhibitors via FBDD

Dougan, D.R., Lawson, J.D.

(2016) Bioorg Med Chem Lett 26: 2774-2778

Released	2016-05-25
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	6KN, MN, SO4

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5LYW \| pdb_00005lyw	Download File View File

CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX; WITH AN INHIBITOR 6-((R)-2-o-Tolyloxymethyl-pyrrolidin-1-yl)-9H-purine

Musil, D., Heinrich, T., Knoechel, T., Lehmann, M.

(2017) Bioorg Med Chem Lett 27: 551-556

Released	2017-08-16
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	7BH, MN

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5LYX \| pdb_00005lyx	Download File View File

CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX; WITH AN INHIBITOR 5-((R)-1-[1,2,4]Triazolo[1,5-a]pyrimidin-7-yl-pyrrolidin-2-ylmethoxy)-isoquinoline

Musil, D., Heinrich, T., Lehmann, M.

(2017) Bioorg Med Chem Lett 27: 551-556

Released	2017-08-16
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	7BF, MN

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6QED \| pdb_00006qed	Download File View File

CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX; WITH AN INHIBITOR (S)-3-Hydroxy-2-oxo-1-(2-oxo-1,2,3,4-tetrahydro-quinolin-6-yl)-pyrrolidine-3-carboxylic acid 3-chloro-5-fluoro-benzylamide

Musil, D., Heinrich, T., Lehmann, M.

(2019) J Med Chem 62: 5025-5039

Released	2019-05-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	DMS, EDO, GOL, HZK, MN

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6QEF \| pdb_00006qef	Download File View File

CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX WITH AN INHIBITOR (S)-3-Hydroxy-2-oxo-1-phenyl-pyrrolidine-3-carboxylic acid 3-chloro-5-fluoro-benzylamide

Musil, D., Heinrich, T., Lehmann, M.

(2019) J Med Chem 62: 5025-5039

Released	2019-05-01
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	EDO, GOL, HZW, MN

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6QEG \| pdb_00006qeg	Download File View File

CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX WITH AN INHIBITOR 2-Oxo-1-phenyl-pyrrolidine-3-carboxylic acid (2-thiophen-2-yl-ethyl)-amide

Musil, D., Heinrich, T., Lehmann, M.

(2019) J Med Chem 62: 5025-5039

Released	2019-05-01
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	GOL, K4K, MN

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6QEH \| pdb_00006qeh	Download File View File

CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX WITH AN INHIBITOR 5-Chloro-quinolin-8-ol

Musil, D., Heinrich, T., Lehmann, M.

(2019) J Med Chem 62: 5025-5039

Released	2019-05-01
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	GOL, HZQ, MN

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6QEI \| pdb_00006qei	Download File View File

CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX WITH AN INHIBITOR 5,6-Difluoro-3-(2-isopropoxy-4-piperazin-1-yl-phenyl)-1H-indole-2-carboxylic acid amide

Musil, D., Heinrich, T., Lehmann, M.

(2019) J Med Chem 62: 5025-5039

Released	2019-05-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	DMS, EDO, GOL, HZE, MN

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6QEJ \| pdb_00006qej	Download File View File

CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX WITH AN INHIBITOR Thiophene-2-sulfonic acid (4-fluoro-benzyl)-(4H-[1,2,4]triazol-3-ylmethyl)-amide

Musil, D., Heinrich, T., Lehmann, M.

(2019) J Med Chem 62: 5025-5039

Released	2019-05-01
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	EDO, HZT, MN, TBU

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7A12 \| pdb_00007a12	Download File View File

CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX WITH AN INHIBITOR GW557358X (COMPOUND 9)

Thorpe, J.H.

(2020) Bioorg Med Chem Lett 30: 127533-127533

Released	2020-09-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	MN, PO4, QVK

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7A13 \| pdb_00007a13	Download File View File

CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX WITH AN INHIBITOR GSK1978537A (COMPOUND 27)

Thorpe, J.H.

(2020) Bioorg Med Chem Lett 30: 127533-127533

Released	2020-09-23
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	MN, PO4, QW5

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7A14 \| pdb_00007a14	Download File View File

CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX WITH AN INHIBITOR GSK2218325A (COMPOUND 32)

Thorpe, J.H.

(2020) Bioorg Med Chem Lett 30: 127533-127533

Released	2020-09-23
Method	X-RAY DIFFRACTION 2.14 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	MN, PO4, QVB

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7A15 \| pdb_00007a15	Download File View File

CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX WITH AN INHIBITOR GSK2224863A (COMPOUND 42)

Thorpe, J.H.

(2020) Bioorg Med Chem Lett 30: 127533-127533

Released	2020-09-23
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	MN, PO4, QV5

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7A16 \| pdb_00007a16	Download File View File

CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX WITH AN INHIBITOR GSK2229238A (COMPOUND 43)

Thorpe, J.H.

(2020) Bioorg Med Chem Lett 30: 127533-127533

Released	2020-09-23
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Methionine aminopeptidase 2 (protein)
Unique Ligands	HZE, MN, PO4

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8ONY \| pdb_00008ony	Download File View File

Human Methionine Aminopeptidase 2 at the 80S ribosome

Klein, M.A., Wild, K., Kisonaite, M., Sinning, I.

(2024) Nat Commun 15: 716-716

Released	2024-02-21
Method	ELECTRON MICROSCOPY 2.92 Å
Organisms	Homo sapiens
Macromolecule	Unique protein chains: 6 Unique nucleic acid chains: 2
Unique Ligands	CO

1 to 25 of 27 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1YW7 | pdb_00001yw7

1YW8 | pdb_00001yw8

1YW9 | pdb_00001yw9

2ADU | pdb_00002adu

2GA2 | pdb_00002ga2

5CLS | pdb_00005cls

5D6E | pdb_00005d6e

5D6F | pdb_00005d6f

5JFR | pdb_00005jfr

5JHU | pdb_00005jhu

5JI6 | pdb_00005ji6

5LYW | pdb_00005lyw

5LYX | pdb_00005lyx

6QED | pdb_00006qed

6QEF | pdb_00006qef

6QEG | pdb_00006qeg

6QEH | pdb_00006qeh

6QEI | pdb_00006qei

6QEJ | pdb_00006qej

7A12 | pdb_00007a12

7A13 | pdb_00007a13

7A14 | pdb_00007a14

7A15 | pdb_00007a15

7A16 | pdb_00007a16

8ONY | pdb_00008ony