RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Gene Name = "UGDH"

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 20 Structures.

Refinements

Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

Homo sapiens (20)

Taxonomy

Eukaryota (20)

Experimental Method

	X-RAY DIFFRACTION (18)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

Protein (20)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (11)
	2.5 - 3.0 (7)
	3.0 - 3.5 (1)

Release Date

	2005 - 2009 (4)
	2010 - 2014 (6)
	2015 - 2019 (8)
	2025 - 2029 (2)

Enzyme Classification Name

Oxidoreductases (20)

Symmetry Type

	Dihedral (14)
	Cyclic (7)
	Asymmetric (1)
	Helical (1)

AllSelected

1 to 20 of 20 Structures

Page 1 of 1

Sort by

Explore in 3D

2Q3E \| pdb_00002q3e	Download File View File

Structure of human UDP-glucose dehydrogenase complexed with NADH and UDP-glucose

Kavanagh, K.L., Guo, K., Bunkoczi, G., Savitsky, P., Pilka, E., Bhatia, C., Smee, C., Berridge, G., von Delft, F., Wiegelt, J., Arrowsmith, C., Sundstrom, M., Edwards, A., Oppermann, U., Structural Genomics Consortium (SGC)

(2011) J Biological Chem 286: 23877-23887

Released	2007-07-03
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	CL, NAI, UPG

Explore in 3D

2QG4 \| pdb_00002qg4	Download File View File

Crystal structure of human UDP-glucose dehydrogenase product complex with UDP-glucuronate

Kavanagh, K.L., Guo, K., Bunkoczi, G., Savitsky, P., Pilka, E., Bhatia, C., Niesen, F., Smee, C., Berridge, G., von Delft, F., Weigelt, J., Arrowsmith, C.H., Sundstrom, M., Edwards, A., Oppermann, U., Structural Genomics Consortium (SGC)

(2011) J Biological Chem 286: 23877-23887

Released	2007-07-10
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	CL, EDO, NAD, UGA

Explore in 3D

3ITK \| pdb_00003itk	Download File View File

Crystal structure of human UDP-glucose dehydrogenase Thr131Ala, apo form.

Chaikuad, A., Egger, S., Yue, W.W., Sethi, R., Filippakopoulos, P., Muniz, J.R.C., von Delft, F., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A.M., Kavanagh, K.L., Nidetzky, B., Oppermann, U., Structural Genomics Consortium (SGC)

(2011) J Biological Chem 286: 23877-23887

Released	2009-09-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	EDO, PG4

Explore in 3D

3KHU \| pdb_00003khu	Download File View File

Crystal structure of human UDP-glucose dehydrogenase Glu161Gln, in complex with thiohemiacetal intermediate

Chaikuad, A., Egger, S., Yue, W.W., Guo, K., Sethi, R., Filippakopoulos, P., Muniz, J.R.C., von Delft, F., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A.M., Kavanagh, K.L., Nidetzky, B., Oppermann, U., Structural Genomics Consortium (SGC)

(2012) J Biological Chem 287: 2119-2129

Released	2009-11-17
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	EDO, EPE, UPG

Explore in 3D

3PRJ \| pdb_00003prj	Download File View File

Role of Packing Defects in the Evolution of Allostery and Induced Fit in Human UDP-Glucose Dehydrogenase.

Kadirvelraj, R., Wood, Z.A.

(2011) Biochemistry 50: 5780-5789

Released	2011-06-15
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	NAI, UDX

Explore in 3D

3PTZ \| pdb_00003ptz	Download File View File

Role of Packing Defects in the Evolution of Allostery and Induced Fit in Human UDP-Glucose Dehydrogenase.

Kadirvelraj, R., Wood, Z.A.

(2011) Biochemistry 50: 5780-5789

Released	2011-06-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	NAD, UDX

Explore in 3D

3TDK \| pdb_00003tdk	Download File View File

Crystal Structure of Human UDP-Glucose Dehydrogenase

Rajakannan, V., Han, C., Robinson, R.

(2011) PLoS One 6: e25226-e25226

Released	2011-10-26
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	NAD, UPG

Explore in 3D

3TF5 \| pdb_00003tf5	Download File View File

Structure of UDP-glucose dehydrogenase V132 deletion

Sennett, N.C., Wood, Z.A.

(2011) Biochemistry 50: 9651-9663

Released	2011-10-12
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)

Explore in 3D

4EDF \| pdb_00004edf	Download File View File

Dimeric hUGDH, K94E

Sennett, N.C., Wood, Z.A.

(2012) Biochemistry 51: 9364-9374

Released	2012-11-21
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	UPG

Explore in 3D

4RJT \| pdb_00004rjt	Download File View File

Crystal Structure of Unliganded, Full Length hUGDH at pH 7.0

Sidlo, A.M., Wood, Z.A.

(2014) Biochemistry 53: 8043-8051

Released	2014-12-31
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	CL

Explore in 3D

5TJH \| pdb_00005tjh	Download File View File

hUGDH A136M Substitution

Beattie, N.R., Wood, Z.A.

(2017) Biochemistry 56: 202-211

Released	2016-11-02
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	CL, POP, UPG

Explore in 3D

5VR8 \| pdb_00005vr8	Download File View File

Human UDP-Glucose Dehydrogenase with UDP-Xylose Bound to the Co-enzyme Site

Kadirvelraj, R., Beattie, N.R., Wood, Z.A.

(2018) Nature 563: 584-588

Released	2017-07-19
Method	X-RAY DIFFRACTION 1.999 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	ADP, UDX

Explore in 3D

5W4X \| pdb_00005w4x	Download File View File

Truncated hUGDH

Sennett, N.C., Custer, G.S., Wood, Z.A.

(2018) Nature 563: 584-588

Released	2017-07-19
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	PG5

Explore in 3D

6C4J \| pdb_00006c4j	Download File View File

Ligand bound full length hUGDH with A104L substitution

Beattie, N.R., Pioso, B.J., Wood, Z.A., Sidlo, A.M.

(2018) Biochemistry 57: 6848-6859

Released	2018-05-16
Method	X-RAY DIFFRACTION 2.53 Å
Organisms	Homo sapiens
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	CL, NAD, PGO, SO4, UPG