RCSB PDB: Search

2F93 \| pdb_00002f93	Download File View File

K Intermediate Structure of Sensory Rhodopsin II/Transducer Complex in Combination with the Ground State Structure

Moukhametzianov, R.I., Klare, J.P., Efremov, R.G., Baecken, C., Goeppner, A., Labahn, J., Engelhard, M., Bueldt, G., Gordeliy, V.I.

(2006) Nature 440: 115-119

Released	2006-03-07
Method	X-RAY DIFFRACTION 2 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin II (protein) Sensory rhodopsin II transducer (protein)
Unique Ligands	BOG, RET

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2F95 \| pdb_00002f95	Download File View File

M intermediate structure of sensory rhodopsin II/transducer complex in combination with the ground state structure

Moukhametzianov, R.I., Klare, J.P., Efremov, R.G., Baecken, C., Goeppner, A., Labahn, J., Engelhard, M., Bueldt, G., Gordeliy, V.I.

(2006) Nature 440: 115-119

Released	2006-03-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin II (protein) Sensory rhodopsin II transducer (protein)
Unique Ligands	BOG, RET

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3QAP \| pdb_00003qap	Download File View File

Crystal structure of Natronomonas pharaonis sensory rhodopsin II in the ground state

Gushchin, I., Reshetnyak, A., Borshchevskiy, V., Ishchenko, A., Round, E., Grudinin, S., Engelhard, M., Buldt, G., Gordeliy, V.

(2011) J Mol Biology 412: 591-600

Released	2011-09-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin-2 (protein)
Unique Ligands	BOG, L2P, LFA, RET

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3QDC \| pdb_00003qdc	Download File View File

Crystal structure of Natronomonas pharaonis sensory rhodopsin II in the active state

Gushchin, I., Reshetnyak, A., Borshchevskiy, V., Ishchenko, A., Round, E., Grudinin, S., Engelhard, M., Buldt, G., Gordeliy, V.

(2011) J Mol Biology 412: 591-600

Released	2011-09-14
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin-2 (protein)
Unique Ligands	BOG, L2P, LFA, RET

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4GYC \| pdb_00004gyc	Download File View File

Structure of the SRII(D75N mutant)/HtrII Complex in I212121 space group ("U" shape)

Ishchenko, A., Round, E., Borshchevskiy, V., Grudinin, S., Gushchin, I., Klare, J., Remeeva, A., Utrobin, P., Balandin, T., Engelhard, M., Bueldt, G., Gordeliy, V.

(2013) J Photochem Photobiol B 123C: 55-58

Released	2013-05-08
Method	X-RAY DIFFRACTION 2.0501 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin II transducer (protein) Sensory rhodopsin-2 (protein)
Unique Ligands	LFA, RET

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5JJE \| pdb_00005jje	Download File View File

Structure of the SRII/HtrII Complex in I212121 space group ("U" shape)

Ishchenko, A., Round, E., Borshchevskiy, V., Grudinin, S., Gushchin, I., Klare, J., Remeeva, A., Polovinkin, V., Utrobin, P., Balandin, T., Engelhard, M., Bueldt, G., Gordeliy, V.

(2017) Sci Rep 7: 41811-41811

Released	2017-02-15
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin II transducer (protein) Sensory rhodopsin-2 (protein)
Unique Ligands	BOG, LFA, RET

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5JJF \| pdb_00005jjf	Download File View File

Structure of the SRII/HtrII Complex in I212121 space group ("U" shape) - M state

Ishchenko, A., Round, E., Borshchevskiy, V., Grudinin, S., Gushchin, I., Klare, J., Remeeva, A., Polovinkin, V., Utrobin, P., Balandin, T., Engelhard, M., Bueldt, G., Gordeliy, V.

(2017) Sci Rep 7: 41811-41811

Released	2017-02-15
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin II transducer (protein) Sensory rhodopsin-2 (protein)
Unique Ligands	BOG, LFA, RET

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5JJJ \| pdb_00005jjj	Download File View File

Structure of the SRII/HtrII Complex in P64 space group ("U" shape)

Ishchenko, A., Round, E., Borshchevskiy, V., Grudinin, S., Gushchin, I., Klare, J., Remeeva, A., Polovinkin, V., Utrobin, P., Balandin, T., Engelhard, M., Bueldt, G., Gordeliy, V.

(2017) Sci Rep 7: 41811-41811

Released	2017-02-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin II transducer (protein) Sensory rhodopsin-2 (protein)
Unique Ligands	LFA, RET

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5JJN \| pdb_00005jjn	Download File View File

Structure of the SRII/HtrII(G83F) Complex in P212121 space group ("V" shape)

Ishchenko, A., Round, E., Borshchevskiy, V., Grudinin, S., Gushchin, I., Klare, J., Remeeva, A., Polovinkin, V., Utrobin, P., Balandin, T., Engelhard, M., Bueldt, G., Gordeliy, V.

(2017) Sci Rep 7: 41811-41811

Released	2017-02-15
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin II transducer (protein) Sensory rhodopsin-2 (protein)
Unique Ligands	BOG, LFA, RET

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7PNC \| pdb_00007pnc	Download File View File

Continuous dark state structure of Sensory Rhodopsin II solved by serial millisecond crystallography

Bosman, R., Ortolani, G., Branden, G., Neutze, R.

To be published

Released	2022-09-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin-2 (protein)
Unique Ligands	BOG, CL, MPG, RET

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7ZCM \| pdb_00007zcm	Download File View File

Dark state structure of Sensory Rhodopsin II in complex with HtrII solved by room temperature serial synchrotron crystallography

Ortolani, G., Bosman, R., Ostojic, L.

To be published

Released	2023-11-29
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin II transducer (protein) Sensory rhodopsin-2 (protein)
Unique Ligands	RET

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8PWG \| pdb_00008pwg	Download File View File

Light structure of sensory rhodopsin-II solved by serial millisecond crystallography 90-120 milliseconds time-bin

Ortolani, G., Bosman, R., Branden, G., Neutze, R.

To be published

Released	2025-02-05
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin-2 (protein)
Unique Ligands	CL, RET

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8PWI \| pdb_00008pwi	Download File View File

Light structure of sensory rhodopsin-II solved by serial millisecond crystallography 60-90 milliseconds time-bin

Bosman, R., Ortolani, G., Branden, G., Neutze, R.

To be published

Released	2025-02-05
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin-2 (protein)
Unique Ligands	CL, RET

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8PWJ \| pdb_00008pwj	Download File View File

Light structure of sensory rhodopsin-II solved by serial millisecond crystallography. 30-60 milliseconds time-bin

Bosman, R., Ortolani, G., Branden, G., Neutze, R.

To be published

Released	2025-02-05
Method	X-RAY DIFFRACTION 2.14 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin-2 (protein)
Unique Ligands	CL, RET

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8PWP \| pdb_00008pwp	Download File View File

Light structure of sensory rhodopsin-II solved by serial millisecond crystallography 0-30 milliseconds time-bin

Ortolani, G., Bosman, R., Branden, G., Neutze, R.

To be published

Released	2025-02-05
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin-2 (protein)
Unique Ligands	CL, RET

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8PWQ \| pdb_00008pwq	Download File View File

Light structure of sensory rhodopsin-II solved by serial millisecond crystallography 120-150 milliseconds time-bin

Bosman, R., Ortolani, G., Branden, G., Neutze, R.

To be published

Released	2025-02-05
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin-2 (protein)
Unique Ligands	CL, RET

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8QQO \| pdb_00008qqo	Download File View File

Continuously illuminated structure of Sensory Rhodopsin II solved by serial millisecond crystallography

Bosman, R., Ortolani, G., Branden, G., Neutze, R.

To be published

Released	2023-10-18
Method	X-RAY DIFFRACTION 2.47 Å
Organisms	Natronomonas pharaonis
Macromolecule	Sensory rhodopsin-2 (protein)
Unique Ligands	RET

2F93 | pdb_00002f93

K Intermediate Structure of Sensory Rhodopsin II/Transducer Complex in Combination with the Ground State Structure

2F95 | pdb_00002f95

M intermediate structure of sensory rhodopsin II/transducer complex in combination with the ground state structure

3QAP | pdb_00003qap

Crystal structure of Natronomonas pharaonis sensory rhodopsin II in the ground state

3QDC | pdb_00003qdc

Crystal structure of Natronomonas pharaonis sensory rhodopsin II in the active state

4GYC | pdb_00004gyc

Structure of the SRII(D75N mutant)/HtrII Complex in I212121 space group ("U" shape)

5JJE | pdb_00005jje

Structure of the SRII/HtrII Complex in I212121 space group ("U" shape)

5JJF | pdb_00005jjf

Structure of the SRII/HtrII Complex in I212121 space group ("U" shape) - M state

5JJJ | pdb_00005jjj

Structure of the SRII/HtrII Complex in P64 space group ("U" shape)

5JJN | pdb_00005jjn

Structure of the SRII/HtrII(G83F) Complex in P212121 space group ("V" shape)

7PNC | pdb_00007pnc

Continuous dark state structure of Sensory Rhodopsin II solved by serial millisecond crystallography

7ZCM | pdb_00007zcm

Dark state structure of Sensory Rhodopsin II in complex with HtrII solved by room temperature serial synchrotron crystallography

8PWG | pdb_00008pwg

Light structure of sensory rhodopsin-II solved by serial millisecond crystallography 90-120 milliseconds time-bin

8PWI | pdb_00008pwi

Light structure of sensory rhodopsin-II solved by serial millisecond crystallography 60-90 milliseconds time-bin

8PWJ | pdb_00008pwj

Light structure of sensory rhodopsin-II solved by serial millisecond crystallography. 30-60 milliseconds time-bin

8PWP | pdb_00008pwp

Light structure of sensory rhodopsin-II solved by serial millisecond crystallography 0-30 milliseconds time-bin

8PWQ | pdb_00008pwq

Light structure of sensory rhodopsin-II solved by serial millisecond crystallography 120-150 milliseconds time-bin

8QQO | pdb_00008qqo

Continuously illuminated structure of Sensory Rhodopsin II solved by serial millisecond crystallography

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Experimental Method

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Refinement Resolution (Å)

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Membrane Protein Annotation

Symmetry Type

SCOP Classification

2F93 | pdb_00002f93

2F95 | pdb_00002f95

3QAP | pdb_00003qap

3QDC | pdb_00003qdc

4GYC | pdb_00004gyc

5JJE | pdb_00005jje

5JJF | pdb_00005jjf

5JJJ | pdb_00005jjj

5JJN | pdb_00005jjn

7PNC | pdb_00007pnc

7ZCM | pdb_00007zcm

8PWG | pdb_00008pwg

8PWI | pdb_00008pwi

8PWJ | pdb_00008pwj

8PWP | pdb_00008pwp

8PWQ | pdb_00008pwq

8QQO | pdb_00008qqo