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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Chem Comp Monomers (Polymer Entity Container Identifiers) = "BEZ"

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Search Summary

This query matches 17 Structures.

Refinements

Structure Determination Methodology

experimental (17)

Scientific Name of Source Organism

	Danio rerio (9)
	Homo sapiens (9)
	synthetic construct (5)
	Dengue virus 2 Thailand/0168/1979 (2)
	Mycobacterium tuberculosis CDC1551 (2)
	Cavally virus (1)
	Dengue virus 3 Singapore/8120/1995 (1)
	Mycobacterium tuberculosis (1)
	West Nile virus (1)

Taxonomy

	Eukaryota (9)
	Riboviria (5)
	other sequences (5)
	Bacteria (2)

Experimental Method

	X-RAY DIFFRACTION (15)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (17)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.5 - 2.0 (1)
	2.0 - 2.5 (3)
	2.5 - 3.0 (4)
	3.0 - 3.5 (6)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (12)
	2015 - 2019 (2)
	2020 - 2024 (2)

Enzyme Classification Name

	Hydrolases (15)
	Transferases (10)
	Ligases (8)

Symmetry Type

	Asymmetric (14)
	Cyclic (4)

SCOP Classification

	All beta proteins (2)
	Artifacts (2)
	Small proteins (1)

AllSelected

1 to 17 of 17 Structures

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2FP7	Download File View File

West Nile Virus NS2B/NS3protease in complex with Bz-Nle-Lys-Arg-Arg-H

Schiering, N., D'Arcy, A., Erbel, P.

(2006) Nat Struct Mol Biol 13: 372-373

Released	2006-03-07
Method	X-RAY DIFFRACTION 1.68 Å
Organisms	West Nile virus synthetic construct
Macromolecule	Genome polyprotein (protein) N-benzoyl-L-norleucyl-L-lysyl-N-[(2S)-5-carbamimidamido-1-hydroxypentan-2-yl]-L-argininamide (protein)

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2M9P	Download File View File

NMR structure of an inhibitor bound dengue NS3 protease

Gibbs, A., Tounge, B., Steele, R.

To be published

Released	2014-07-09
Method	SOLUTION NMR
Organisms	Dengue virus 2 Thailand/0168/1979
Macromolecule	Serine protease inhibitor (protein) Serine protease subunit NS2B, Serine protease NS3 (protein)

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2M9Q	Download File View File

NMR structure of an inhibitor bound dengue NS3 protease

Gibbs, A., Steele, R., Tounge, B.

To be published

Released	2014-07-09
Method	SOLUTION NMR
Organisms	Dengue virus 2 Thailand/0168/1979
Macromolecule	Serine protease inhibitor (protein) Serine protease subunit NS2B, Serine protease NS3 (protein)

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3U1I	Download File View File

Dengue virus protease covalently bound to a peptide

Noble, C.G.

(2012) J Virol 86: 438-446

Released	2011-11-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Dengue virus 3 Singapore/8120/1995
Macromolecule	Serine protease NS3 (protein) Serine protease subunit NS2B (protein) peptide of (BEZ)(NLE)KR(OAR) (protein)
Unique Ligands	SO4

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4UTN	Download File View File

Crystal structure of zebrafish Sirtuin 5 in complex with succinylated CPS1-peptide

Pannek, M., Gertz, M., Steegborn, C.

(2014) Angew Chem Int Ed Engl 53: 10728

Released	2014-08-20
Method	X-RAY DIFFRACTION 3 Å
Organisms	Danio rerio Homo sapiens
Macromolecule	NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL (protein) SUCCINYL-CPS1-PEPTIDE (protein)
Unique Ligands	DMS, EDO, EPE, ZN

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4UTR	Download File View File

Crystal structure of zebrafish Sirtuin 5 in complex with glutarylated CPS1-peptide

Pannek, M., Gertz, M., Steegborn, C.

(2014) Angew Chem Int Ed Engl 53: 10728

Released	2014-08-20
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Danio rerio Homo sapiens
Macromolecule	GLUTARYL-CPS1 PEPTIDE (protein) NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL (protein)
Unique Ligands	DMS, EDO, GUA, NA, ZN

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4UTV	Download File View File

Crystal structure of zebrafish Sirtuin 5 in complex with 3-phenyl- succinylated CPS1-peptide

Pannek, M., Gertz, M., Steegborn, C.

(2014) Angew Chem Int Ed Engl 53: 10728

Released	2014-08-20
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Danio rerio Homo sapiens
Macromolecule	CARBAMOYLPHOSPHATE SYNTHETASE I (protein) NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL (protein)
Unique Ligands	DMS, EPE, F9V, FSL, NA, ZN

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4UTX	Download File View File

Crystal structure of zebrafish Sirtuin 5 in complex with 3-nitro- propionylated CPS1-peptide

Pannek, M., Gertz, M., Steegborn, C.

(2014) Angew Chem Int Ed Engl 53: 10728

Released	2014-08-20
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Danio rerio Homo sapiens
Macromolecule	CARBAMOYLPHOSPHATE SYNTHETASE I (protein) NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL (protein)
Unique Ligands	3NP, DMS, EDO, EPE, NA, ZN

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4UTZ	Download File View File

Crystal structure of zebrafish Sirtuin 5 in complex with adipoylated CPS1-peptide

Pannek, M., Gertz, M., Steegborn, C.

(2014) Angew Chem Int Ed Engl 53: 10728

Released	2014-08-20
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Danio rerio Homo sapiens
Macromolecule	CARBAMOYLPHOSPHATE SYNTHETASE I (protein) SIRTUIN 5 (protein)
Unique Ligands	0L1, DMS, EDO, EPE, NA, ZN

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4UU7	Download File View File

Crystal structure of zebrafish Sirtuin 5 in complex with 3-methyl- succinylated CPS1-peptide

Pannek, M., Gertz, M., Steegborn, C.

(2014) Angew Chem Int Ed Engl 53: 10728

Released	2014-08-20
Method	X-RAY DIFFRACTION 3 Å
Organisms	Danio rerio Homo sapiens
Macromolecule	CARBAMOYLPHOSPHATE SYNTHETASE I (protein) NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL (protein)
Unique Ligands	DMS, EDO, EPE, JO3, NA, SUH, ZN

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4UU8	Download File View File

Crystal structure of zebrafish Sirtuin 5 in complex with 3,3-dimethyl- succinylated CPS1-peptide

Pannek, M., Gertz, M., Steegborn, C.

(2014) Angew Chem Int Ed Engl 53: 10728

Released	2014-08-20
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Danio rerio Homo sapiens
Macromolecule	CARBAMOYLPHOSPHATE SYNTHETASE I (protein) NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL (protein)
Unique Ligands	DMS, EDO, EPE, NA, WOC, ZN

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4UUA	Download File View File

Crystal structure of zebrafish Sirtuin 5 in complex with 3S-Z-amino- succinylated CPS1-peptide

Pannek, M., Gertz, M., Steegborn, C.

(2014) Angew Chem Int Ed Engl 53: 10728

Released	2014-08-20
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Danio rerio Homo sapiens
Macromolecule	CARBAMOYLPHOSPHATE SYNTHETASE I (protein) NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL (protein)
Unique Ligands	DMS, EDO, EPE, NA, NX6, ZN

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4UUB	Download File View File

Crystal structure of zebrafish Sirtuin 5 in complex with 2R-butyl- succinylated CPS1-peptide

Pannek, M., Gertz, M., Steegborn, C.

(2014) Angew Chem Int Ed Engl 53: 10728

Released	2014-08-20
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Danio rerio Homo sapiens
Macromolecule	CARBAMOYLPHOSPHATE SYNTHETASE I (protein) NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL (protein)
Unique Ligands	DMS, EDO, EPE, NA, SU8, ZN

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5DZK	Download File View File

Crystal structure of the active form of the proteolytic complex clpP1 and clpP2

LI, M., Wlodawer, A., Maurizi, M.

(2016) J Biol Chem 291: 7465-7476

Released	2016-02-17
Method	X-RAY DIFFRACTION 3.07 Å
Organisms	Mycobacterium tuberculosis CDC1551 synthetic construct
Macromolecule	ATP-dependent Clp protease proteolytic subunit 1 (protein) ATP-dependent Clp protease proteolytic subunit 2 (protein) BEZ-LEU-LEU (protein)

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5LAK	Download File View File

Ligand-bound structure of Cavally Virus 3CL Protease

Kanitz, M., Heine, A., Diederich, W.E.

(2019) Virology 533: 21-33

Released	2017-07-12
Method	X-RAY DIFFRACTION 2.299 Å
Organisms	Cavally virus synthetic construct
Macromolecule	3Cl Protease (protein) BEZ-TYR-TYR-ASN-ECC Peptide inhibitor (protein)
Unique Ligands	1PE, PGE

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7X8X	Download File View File

structural insights into Mycobacterium tuberculosis ClpP1P2 inhibition by Cediranib: implications for developing antimicrobial agents targeting Clp protease

Bao, R., Luo, Y.F., Zhu, Y.B., Yang, Y., Zhou, Y.Z.

(2023) J Med Chem 66: 16597-16614

Released	2023-04-12
Method	X-RAY DIFFRACTION 3.24 Å
Organisms	Mycobacterium tuberculosis Mycobacterium tuberculosis CDC1551 synthetic construct
Macromolecule	4-[[3,5-bis(fluoranyl)phenyl]methyl]-N-[(4-bromophenyl)methyl]piperazine-1-carboxamide (protein) ATP-dependent Clp protease proteolytic subunit 1 (protein) ATP-dependent Clp protease proteolytic subunit 2 (protein)
Unique Ligands	AI4

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8GIV	Download File View File

Porous framework formed by assembly of a bipyridyl-conjugated helical peptide

Hess, S.S., Nguyen, A.I.

(2023) J Am Chem Soc 145: 19588-19600

Released	2023-11-15
Method	X-RAY DIFFRACTION 0.99 Å
Organisms	synthetic construct
Macromolecule	bipyridyl-conjugated helical peptide (protein)

1 to 17 of 17 Structures

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