RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Chem Comp Monomers (Polymer Entity Container Identifiers) = "LE1"

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 14 Structures.

Refinements

Structure Determination Methodology

experimental (14)

Scientific Name of Source Organism

	Homo sapiens (5)
	Podisus maculiventris (5)
	Escherichia coli K-12 (3)
	synthetic construct (3)
	Inovirus M13 (2)
	Acinetobacter baumannii (1)
	Klebsiella pneumoniae (1)

Taxonomy

	Eukaryota (10)
	Bacteria (5)
	other sequences (3)
	Monodnaviria (2)

Experimental Method

	SOLUTION NMR (8)
	X-RAY DIFFRACTION (6)

Polymer Entity Type

Protein (14)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (2)
	2.0 - 2.5 (1)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (3)
	2015 - 2019 (1)
	2020 - 2024 (9)

Symmetry Type

	Asymmetric (12)
	Cyclic (2)

SCOP Classification

	All beta proteins (2)
	Alpha and beta proteins (a+b) (1)

AllSelected

1 to 14 of 14 Structures

Page 1 of 1

Sort by

Explore in 3D

3H5F	Download File View File

Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides.

Peacock, A.F.A., Stuckey, J.A., Pecoraro, V.L.

(2009) Angew Chem Int Ed Engl 48: 7371-7374

Released	2009-07-14
Method	X-RAY DIFFRACTION 1.86 Å
Macromolecule	COIL SER L16L-Pen (protein)
Unique Ligands	ACT, CL, ZN

Explore in 3D

3M17	Download File View File

Crystal structure of human FcRn with a monomeric peptide inhibitor

Mezo, A.R., Sridhar, V., Badger, J., Sakorafas, P., Nienaber, V.

(2010) J Biological Chem 285: 27694-27701

Released	2010-06-16
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) IgG receptor FcRn large subunit p51 (protein) monomeric peptide inhibitor (protein)

Explore in 3D

3M1B	Download File View File

Crystal structure of human FcRn with a dimeric peptide inhibitor

Mezo, A.R., Sridhar, V., Badger, J., Sakorafas, P., Nienaber, V.

(2010) J Biological Chem 285: 27694-27701

Released	2010-06-16
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) DIMERIC PEPTIDE INHIBITOR (protein) IgG receptor FcRn large subunit p51 (protein)

Explore in 3D

3PBJ	Download File View File

Hydrolytic catalysis and structural stabilization in a designed metalloprotein

Zastrow, M.L., Peacock, A.F.A., Stuckey, J.A., Pecoraro, V.L.

(2012) Nat Chem 4: 118-123

Released	2011-11-30
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	synthetic construct
Macromolecule	COIL SER L9L-Pen L23H (protein)
Unique Ligands	CL, HG, NA, ZN

Explore in 3D

5OJT	Download File View File

Structure-Activity Relationships and Biological Characterization of a Novel, Potent and Serum Stable C-X-C chemokine receptor type 4 (CXCR4) Antagonist

Brancaccio, D., Carotenuto, A.

(2017) J Med Chem 60: 9641-9652

Released	2017-11-22
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	ACE-ARG-ALA-(D)CYS-ARG-BNA-HIS-PEN (protein)

Explore in 3D

7FB8	Download File View File

De Novo-Designed and Disulfide-Bridged Peptide Heterodimer - hd1

Yao, H., Yao, S., Zheng, Y., Moyer, A., Baker, D., Wu, C.

(2022) Nat Commun 13: 1539-1539

Released	2022-05-18
Method	SOLUTION NMR
Organisms	Inovirus M13
Macromolecule	ASP-ASP-LYS-ASP-CYS-ASP-GLU-TYR-CYS-LYS-LYS-THR-LYS-GLU-NH2 (protein) GLU-LE1-THR-GLY-HIS-ILE-GLU-GLY-PRO-THR-LE1-THR-LE1-HIS-CYS-LYS-NH2 (protein)

Explore in 3D

7FBA	Download File View File

De Novo-Designed and Disulfide-Bridged Peptide Heterodimer - hd2

Yao, H., Yao, S., Moyer, A., Zheng, Y., Baker, D., Wu, C.

(2022) Nat Commun 13: 1539-1539

Released	2022-05-18
Method	SOLUTION NMR
Organisms	Inovirus M13
Macromolecule	ALA-LE1-CYS-GLU-CYS-GLY-PRO-THR-ARG-GLU-CYS-LYS-NH2 (protein) GLU-CYS-ARG-GLU-TYR-GLY-PRO-LE1-LYS-LE1-LE1-ALA-NH2 (protein)

Explore in 3D

7QS6	Download File View File

Solution structure of thanatin-like derivative 7 in complex with E.coli LptA

Moehle, K., Zerbe, O.

(2023) Sci Adv 9: eadg3683-eadg3683

Released	2023-05-10
Method	SOLUTION NMR
Organisms	Escherichia coli K-12 Podisus maculiventris
Macromolecule	Lipopolysaccharide export system protein LptA (protein) Thanatin-like derivative (protein)

Explore in 3D

7ZAX	Download File View File

Solution structure of thanatin-like derivative 7 in complex with K. pneumoniae LptA

Oi, K.K., Moehle, K., Zerbe, O.

(2023) Sci Adv 9: eadg3683-eadg3683

Released	2023-06-07
Method	SOLUTION NMR
Organisms	Klebsiella pneumoniae Podisus maculiventris
Macromolecule	Lipopolysaccharide export system protein LptA (protein) Thanatin-like derivative (protein)

Explore in 3D

7ZED	Download File View File

Solution structure of thanatin-like derivative 7 in complex with E.coli LptA mutant Q62L

Moehle, K., Zerbe, O.

(2023) Sci Adv 9: eadg3683-eadg3683

Released	2023-06-07
Method	SOLUTION NMR
Organisms	Escherichia coli K-12 Podisus maculiventris
Macromolecule	Lipopolysaccharide export system protein LptA (protein) Thanatin-like derivative (protein)

Explore in 3D

7ZKR	Download File View File

Human GABARAP in complex with stapled peptide Pen3-ortho

Ueffing, A., Brown, H., Willbold, D., Kritzer, J.A., Weiergraeber, O.H.

(2022) J Am Chem Soc 144: 14687-14697

Released	2022-08-31
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Gamma-aminobutyric acid receptor-associated protein (protein) Pen3-ortho (protein)
Unique Ligands	CL, OXE, PO4

Explore in 3D

7ZL7	Download File View File

Human GABARAP in complex with stapled peptide Pen8-ortho

Ueffing, A., Brown, H., Willbold, D., Kritzer, J.A., Weiergraeber, O.H.

(2022) J Am Chem Soc 144: 14687-14697

Released	2022-08-31
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Gamma-aminobutyric acid receptor-associated protein (protein) Pen8-ortho (protein)
Unique Ligands	CL, NA, OXE

Explore in 3D

8BSS	Download File View File

Solution Structure of thanatin-like derivative 5 in complex with E. coli LptA mutant Q62L

Oi, K.K., Jurt, S., Moehle, K., Zerbe, O.

(2023) Sci Adv 9: eadg3683-eadg3683

Released	2023-06-07
Method	SOLUTION NMR
Organisms	Escherichia coli K-12 Podisus maculiventris
Macromolecule	Lipopolysaccharide export system protein LptA (protein) Thanatin-like derivative (protein)

Explore in 3D

8ONU	Download File View File

Solution structure of thanatin analogue 7 in complex with LptAm(Ab)1.0

Oi, K.K., Moehle, K., Zerbe, O.

(2023) Molecules 28:

Released	2023-06-14
Method	SOLUTION NMR
Organisms	Acinetobacter baumannii Podisus maculiventris
Macromolecule	Lipopolysaccharide export system protein LptA (protein) Thanatin-like derivative (protein)