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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "Membrane protein, transport protein"

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Search Summary

This query matches 87 Structures.

Refinements

Structure Determination Methodology

experimental (87)

Scientific Name of Source Organism

	Homo sapiens (17)
	Gloeobacter violaceus (16)
	Gloeobacter violaceus PCC 7421 (16)
	Mus musculus (11)
	Rattus norvegicus (10)
	Escherichia coli (6)
	Escherichia coli K-12 (4)
	Vibrio cholerae O1 biovar El Tor str. N16961 (3)
	synthetic construct (3)
	Campylobacter jejuni (2)

More...

Taxonomy

	Bacteria (54)
	Eukaryota (33)
	other sequences (3)
	Archaea (2)

Experimental Method

	X-RAY DIFFRACTION (70)
	ELECTRON MICROSCOPY (14)
	SOLUTION NMR (3)

Polymer Entity Type

Protein (87)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.0 - 2.5 (10)
	2.5 - 3.0 (23)
	3.0 - 3.5 (34)
	3.5 - 4.0 (9)
	4.0 - 4.5 (4)
	> 4.5 (1)

Release Date

	2005 - 2009 (11)
	2010 - 2014 (48)
	2015 - 2019 (12)
	2020 - 2024 (16)

Enzyme Classification Name

	Translocases (6)
	Hydrolases (7)
	Oxidoreductases (6)
	Transferases (3)

Membrane Protein Annotation

	PDBTM (69)
	MemProtMD (62)
	mpstruc (33)
	OPM (31)

Symmetry Type

	Cyclic (64)
	Asymmetric (26)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (5)
	Membrane and cell surface proteins and peptides (1)
	All beta proteins (1)
	Artifacts (1)

AllSelected

1 to 25 of 87 Structures

Page 1 of 4

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2GIF \| pdb_00002gif	Download File View File

Asymmetric structure of trimeric AcrB from Escherichia coli

Seeger, M.A., Schiefner, A., Eicher, T., Verrey, F., Diederichs, K., Pos, K.M.

(2006) Science 313: 1295-1298

Released	2006-09-12
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Escherichia coli
Macromolecule	Acriflavine resistance protein B (protein)
Unique Ligands	FLC

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2HRT \| pdb_00002hrt	Download File View File

Asymmetric structure of trimeric AcrB from Escherichia coli

Seeger, M.A., Schiefner, A., Eicher, T., Verrey, F., Diederichs, K., Pos, K.M.

(2006) Science 313: 1295-1298

Released	2006-09-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	Escherichia coli K-12
Macromolecule	Acriflavine resistance protein B (protein)
Unique Ligands	FLC

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2K32 \| pdb_00002k32	Download File View File

Truncated AcrA from Campylobacter jejuni for glycosylation studies

Slynko, V., Schubert, M., Numao, S., Kowarik, M., Aebi, M., Allain, F.

(2009) J Am Chem Soc 131: 1274-1281

Released	2009-02-03
Method	SOLUTION NMR
Organisms	Campylobacter jejuni
Macromolecule	A (protein)

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2K33 \| pdb_00002k33	Download File View File

Solution structure of an N-glycosylated protein using in vitro glycosylation

Slynko, V., Schubert, M., Numao, S., Kowarik, M., Aebi, M., Allain, F.H.-T.

(2009) J Am Chem Soc 131: 1274-1281

Released	2009-02-03
Method	SOLUTION NMR
Organisms	Campylobacter jejuni
Macromolecule	AcrA (protein)
Unique branched monosaccharides	A2G, B6D, BGC

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2R9R \| pdb_00002r9r	Download File View File

Shaker family voltage dependent potassium channel (kv1.2-kv2.1 paddle chimera channel) in association with beta subunit

Long, S.B., Tao, X., Campbell, E.B., Mackinnon, R.

(2007) Nature 450: 376-382

Released	2007-11-20
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Rattus norvegicus
Macromolecule	Paddle chimera voltage gated potassium channel Kv1.2-Kv2.1 (protein) Voltage-gated potassium channel subunit beta-2 (protein)
Unique Ligands	K, NAP, PGW

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2RDD \| pdb_00002rdd	Download File View File

X-ray crystal structure of AcrB in complex with a novel transmembrane helix.

Tornroth-Horsefield, S., Gourdon, P., Horsefield, R., Neutze, R.

(2007) Structure 15: 1663-1673

Released	2007-12-11
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Escherichia coli
Macromolecule	Acriflavine resistance protein B (protein) UPF0092 membrane protein yajC (protein)
Unique Ligands	AIC

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2RR3 \| pdb_00002rr3	Download File View File

Solution structure of the complex between human VAP-A MSP domain and human OSBP FFAT motif

Furuita, K., Jee, J., Fukada, H., Mishima, M., Kojima, C.

(2010) J Biological Chem 285: 12961-12970

Released	2010-03-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Oxysterol-binding protein 1 (protein) Vesicle-associated membrane protein-associated protein A (protein)

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3AWR \| pdb_00003awr	Download File View File

Crystal structure of Rat TOM20-ALDH presequence complex: The intermolecular disulfide bond was cleaved in the crystal of a disulfide-tethered complex.

Igura, M., Ose, T., Kohda, D.

(2011) Biochemistry 50: 5487-5496

Released	2011-07-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rattus norvegicus
Macromolecule	Aldehyde dehydrogenase, mitochondrial (protein) Mitochondrial import receptor subunit TOM20 homolog (protein)

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3AX2 \| pdb_00003ax2	Download File View File

Crystal structure of rat TOM20-ALDH presequence complex: a disulfide-tethered complex with a non-optimized, long linker

Saitoh, T., Maita, Y., Kohda, D.

(2011) Biochemistry 50: 5487-5496

Released	2011-07-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus norvegicus
Macromolecule	Aldehyde dehydrogenase, mitochondrial (protein) Mitochondrial import receptor subunit TOM20 homolog (protein)
Unique Ligands	PO4

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3AX3 \| pdb_00003ax3	Download File View File

Crystal structure of rat TOM20-ALDH presequence complex: a complex (form2) between Tom20 and a disulfide-bridged presequence peptide containing D-Cys and L-Cys at the i and i+3 positions.

Saitoh, T., Maita, Y., Kohda, D.

(2011) Biochemistry 50: 5487-5496

Released	2011-07-06
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rattus norvegicus
Macromolecule	Aldehyde dehydrogenase, mitochondrial (protein) Mitochondrial import receptor subunit TOM20 homolog (protein)

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3AX5 \| pdb_00003ax5	Download File View File

Crystal structure of rat TOM20-ALDH presequence complex: A complex (form1) between Tom20 and a disulfide-bridged presequence peptide containing D-Cys and L-Cys at the i and i+3 positions.

Saitoh, T., Maita, Y., Kohda, D.

(2011) Biochemistry 50: 5487-5496

Released	2011-07-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Rattus norvegicus
Macromolecule	Aldehyde dehydrogenase, mitochondrial (protein) Mitochondrial import receptor subunit TOM20 homolog (protein)
Unique Ligands	PO4

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3EAM \| pdb_00003eam	Download File View File

An open-pore structure of a bacterial pentameric ligand-gated ion channel

Bocquet, N., Nury, H., Baaden, M., Le Poupon, C., Changeux, J.P., Delarue, M., Corringer, P.J.

(2009) Nature 457: 111-114

Released	2008-11-04
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Gloeobacter violaceus
Macromolecule	Glr4197 protein (protein)
Unique Ligands	LMT, PC1

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3HD6 \| pdb_00003hd6	Download File View File

Crystal Structure of the Human Rhesus Glycoprotein RhCG

Gruswitz, F., Chaudhary, S., Ho, J.D., Pezeshki, B., Ho, C.-M., Stroud, R.M., Center for Structures of Membrane Proteins (CSMP)

(2010) Proc Natl Acad Sci U S A 107: 9638-9643

Released	2009-09-01
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Ammonium transporter Rh type C (protein)
Unique Ligands	BOG

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3IGQ \| pdb_00003igq	Download File View File

Crystal structure of the extracellular domain of a bacterial pentameric ligand-gated ion channel

Nury, H., Delarue, M.

(2010) J Mol Biology 395: 1114-1127

Released	2009-12-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Gloeobacter violaceus
Macromolecule	Glr4197 protein (protein)
Unique Ligands	ACY, CL, HG, NA

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3KG2 \| pdb_00003kg2	Download File View File

AMPA subtype ionotropic glutamate receptor in complex with competitive antagonist ZK 200775

Sobolevsky, A.I., Rosconi, M.P., Gouaux, E.

(2009) Nature 462: 745-756

Released	2009-12-08
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 2 (protein)
Unique Ligands	ZK1
Unique branched monosaccharides	BMA, NAG

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3KGC \| pdb_00003kgc	Download File View File

Isolated ligand binding domain dimer of GluA2 ionotropic glutamate receptor in complex with glutamate, LY 404187 and ZK 200775

Sobolevsky, A.I., Rosconi, M.P., Gouaux, E.

(2009) Nature 462: 745-755

Released	2009-12-15
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 2 (protein)
Unique Ligands	GLU, LY7, SO4, ZK1

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3LNM \| pdb_00003lnm	Download File View File

F233W mutant of the Kv2.1 paddle-Kv1.2 chimera channel

Tao, X., Lee, A., Limapichat, W., Dougherty, D.A., MacKinnon, R.

(2010) Science 328: 67-73

Released	2010-04-14
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Rattus norvegicus
Macromolecule	F233W mutant of the Kv2.1 paddle-Kv1.2 chimera (protein) Voltage-gated potassium channel subunit beta-2 (protein)
Unique Ligands	K, NAP, PGW

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3LSV \| pdb_00003lsv	Download File View File

Structure of the A237F mutant of the pentameric ligand gated ion channel from Gloeobacter Violaceus

Nury, H., Corringer, P.J., Delarue, M.

(2010) Proc Natl Acad Sci U S A 107: 6275-6280

Released	2010-04-28
Method	X-RAY DIFFRACTION 3.15 Å
Organisms	Gloeobacter violaceus
Macromolecule	Ligand-gated ion channel (protein)

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3MT5 \| pdb_00003mt5	Download File View File

Crystal Structure of the Human BK Gating Apparatus

Yuan, P., MacKinnon, R.

(2010) Science 329: 182-186

Released	2010-06-09
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	Potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (protein)
Unique Ligands	CA, SO4

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3P4W \| pdb_00003p4w	Download File View File

Structure of desflurane bound to a pentameric ligand-gated ion channel, GLIC

Nury, H., Van Renterghem, C., Weng, Y., Tran, A., Baaden, M., Dufresne, V., Changeux, J.P., Sonner, J.M., Delarue, M., Corringer, P.J.

(2011) Nature 469: 428-431

Released	2011-01-19
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Gloeobacter violaceus
Macromolecule	Glr4197 protein (protein)
Unique Ligands	DSF, LMT, PLC

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3P50 \| pdb_00003p50	Download File View File

Structure of propofol bound to a pentameric ligand-gated ion channel, GLIC

Nury, H., Van Renterghem, C., Weng, Y., Tran, A., Baaden, M., Dufresne, V., Changeux, J.P., Sonner, J.M., Delarue, M., Corringer, P.J.

(2011) Nature 469: 428-431

Released	2011-01-19
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Gloeobacter violaceus
Macromolecule	Glr4197 protein (protein)
Unique Ligands	LMT, PFL, PLC

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3QNQ \| pdb_00003qnq	Download File View File

Crystal structure of the transporter ChbC, the IIC component from the N,N'-diacetylchitobiose-specific phosphotransferase system

Cao, Y., Jin, X., Huang, H., Levin, E.J., Zhou, M., New York Consortium on Membrane Protein Structure (NYCOMPS)

(2011) Nature 473: 50-54

Released	2011-04-06
Method	X-RAY DIFFRACTION 3.295 Å
Organisms	Bacillus cereus ATCC 10987
Macromolecule	PTS system, cellobiose-specific IIC component (protein)
Unique Ligands	CIT, ZDM
Unique branched monosaccharides	GLC, NAG