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234,785 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "PROTEIN BINDING/INHIBITOR"

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Search Summary

This query matches 132 Structures.

Refinements

Structure Determination Methodology

experimental (132)

Scientific Name of Source Organism

	Homo sapiens (120)
	Plasmodium falciparum 3D7 (8)
	Bos taurus (2)
	Danio rerio (2)
	Burkholderia pseudomallei 1710b (1)
	Lymnaea stagnalis (1)
	Saccharomyces cerevisiae S288C (1)
	synthetic construct (1)

Taxonomy

	Eukaryota (131)
	Bacteria (1)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (131)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (132)

Refinement Resolution (Å)

	1.0 - 1.5 (21)
	1.5 - 2.0 (76)
	2.0 - 2.5 (27)
	2.5 - 3.0 (4)
	3.0 - 3.5 (3)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (51)
	2015 - 2019 (53)
	2020 - 2024 (24)
	2025 - 2029 (3)

Enzyme Classification Name

	Transferases (13)
	Oxidoreductases (4)
	Hydrolases (3)
	Ligases (3)
	Isomerases (1)

Symmetry Type

	Asymmetric (115)
	Cyclic (17)

SCOP Classification

	All alpha proteins (61)
	Artifacts (56)
	All beta proteins (22)
	Alpha and beta proteins (a+b) (25)

AllSelected

1 to 25 of 132 Structures

Page 1 of 6

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2JP5 \| pdb_00002jp5	Download File View File

ATWLPPR an anti-angiogenic peptide

Badache, S., Bouchemal, N.C., Herve du Penhoat, C.L.M.

(2007) Peptides 28: 2397-2402

Released	2008-03-04
Method	SOLUTION NMR
Macromolecule	ATWLPPR peptide (protein)

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3T0L \| pdb_00003t0l	Download File View File

Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening

Thiel, P., Ottmann, C.

(2013) Chem Commun (Camb) 49: 8468-8470

Released	2012-12-26
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein)
Unique Ligands	1CT, CL, GOL, MG

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3T0M \| pdb_00003t0m	Download File View File

Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening

Thiel, P., Ottmann, C.

(2013) Chem Commun (Camb) 49: 8468-8470

Released	2012-12-26
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein)
Unique Ligands	2CT, CL, GOL, MG

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3TDZ \| pdb_00003tdz	Download File View File

N-terminal acetylation acts as an avidity enhancer within an interconnected multiprotein complex: Structure of a human Cul1WHB-Dcn1P-stapled acetylated Ubc12N complex

Scott, D.C., Monda, J.K., Bennett, E.J., Harper, J.W., Schulman, B.A.

(2011) Science 334: 674-678

Released	2011-10-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Cullin-1 (protein) DCN1-like protein 1 (protein) STAPLED PEPTIDE (protein)

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3TJ2 \| pdb_00003tj2	Download File View File

Structure of a novel submicromolar MDM2 inhibitor

Wolf, S., Huang, Y., Popowicz, G.M., Goda, S., Holak, T.A., Doemling, A.

To be published

Released	2012-09-12
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase Mdm2 (protein)
Unique Ligands	K, TJ2

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4DHM \| pdb_00004dhm	Download File View File

Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening

Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.

(2013) Chem Commun (Camb) 49: 8468-8470

Released	2013-07-31
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein)
Unique Ligands	0KB, CL, GOL, MG

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4DHN \| pdb_00004dhn	Download File View File

Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening

Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.

(2013) Chem Commun (Camb) 49: 8468-8470

Released	2013-07-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein)
Unique Ligands	0KC, CL, GOL, MG

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4DHO \| pdb_00004dho	Download File View File

Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening

Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.

(2013) Chem Commun (Camb) 49: 8468-8470

Released	2013-07-31
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein)
Unique Ligands	CL, GOL, MG, Y09

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4DHP \| pdb_00004dhp	Download File View File

Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening

Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.

(2013) Chem Commun (Camb) 49: 8468-8470

Released	2013-07-31
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein)
Unique Ligands	CL, GOL, MG, Y07

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4DHQ \| pdb_00004dhq	Download File View File

Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening

Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.

(2013) Chem Commun (Camb) 49: 8468-8470

Released	2013-07-31
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein)
Unique Ligands	CL, GOL, MG, Y06

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4DHR \| pdb_00004dhr	Download File View File

Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening

Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.

(2013) Chem Commun (Camb) 49: 8468-8470

Released	2013-07-31
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein)
Unique Ligands	CL, GOL, MG, Y04

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4DHS \| pdb_00004dhs	Download File View File

Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening

Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.

(2013) Chem Commun (Camb) 49: 8468-8470

Released	2013-07-31
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 PROTEIN SIGMA (protein)
Unique Ligands	CL, GOL, MG, Y03

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4DHT \| pdb_00004dht	Download File View File

Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening

Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.

(2013) Chem Commun (Camb) 49: 8468-8470

Released	2013-07-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 PROTEIN SIGMA (protein)
Unique Ligands	0KG, CL, GOL, MG

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4DHU \| pdb_00004dhu	Download File View File

Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening

Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.

(2013) Chem Commun (Camb) 49: 8468-8470

Released	2013-07-31
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 PROTEIN SIGMA (protein)
Unique Ligands	0KH, CL, GOL, MG

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4E96 \| pdb_00004e96	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor PFi-1

Filippakopoulos, P., Picaud, S., Felletar, I., Fedorov, O., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Fish, P., Bunnage, M., Owen, D., Knapp, S., Cook, A., Structural Genomics Consortium (SGC)

(2012) J Med Chem 55: 9831-9837

Released	2012-04-18
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein)
Unique Ligands	0NS, DMS, EDO, NA

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4FQO \| pdb_00004fqo	Download File View File

Crystal Structure of Calcium-Loaded S100B Bound to SBi4211

McKnight, L.E., Raman, E.P., Bezawada, P., Kudrimoti, S., Wilder, P.T., Hartman, K.G., Toth, E.A., Coop, A., MacKerrell, A.D., Weber, D.J.

(2012) ACS Med Chem Lett 3: 975-979

Released	2012-10-17
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Bos taurus
Macromolecule	Protein S100-B (protein)
Unique Ligands	AZ3, CA

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4GPJ \| pdb_00004gpj	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with a isoxazolylbenzimidazole ligand

Filippakopoulos, P., Picaud, S., Qi, J., Felletar, I., Heightman, T.D., Brennan, P., von Delft, F., Bountra, C., Arrowsmith, C.H., Edwards, A., Knapp, S., Structural Genomics Consortium (SGC)

(2013) Medchemcomm 4: 140-144

Released	2012-10-17
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein)
Unique Ligands	0Q1, EDO, NA

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4HBV \| pdb_00004hbv	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with a quinazolin ligand

Filippakopoulos, P., Picaud, S., Qi, J., Felletar, I., von Delft, F., Bountra, C., Arrowsmith, C.H., Edwards, A., Fish, P.V., Bunnage, M.E., Cook, A.S., Owen, D.R., Knapp, S., Structural Genomics Consortium (SGC)

(2012) J Med Chem 55: 9831-9837

Released	2012-10-31
Method	X-RAY DIFFRACTION 1.63 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein)
Unique Ligands	15E, EDO

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4HBW \| pdb_00004hbw	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with a quinazoline ligand

(2012) J Med Chem 55: 9831-9837

Released	2012-10-31
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein)
Unique Ligands	14Z, EDO, K