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235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "RNA POLYMERASE"

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This query matches 8 Structures.

Refinements

Structure Determination Methodology

experimental (8)

Scientific Name of Source Organism

	Cystovirus phi6 (4)
	Aquifex aeolicus (1)
	Homo sapiens (1)
	Methanocaldococcus jannaschii (1)
	Saccharomyces cerevisiae (1)

Taxonomy

	Riboviria (4)
	Eukaryota (2)
	Archaea (1)
	Bacteria (1)

Experimental Method

	X-RAY DIFFRACTION (4)
	SOLUTION NMR (3)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

	Protein (8)
	DNA (3)

Refinement Resolution (Å)

	2.5 - 3.0 (2)
	3.0 - 3.5 (2)
	> 4.5 (1)

Release Date

	1995 - 1999 (2)
	2000 - 2004 (4)
	2005 - 2009 (1)
	2015 - 2019 (1)

Enzyme Classification Name

Transferases (7)

Symmetry Type

Asymmetric (8)

SCOP Classification

	Multi-domain proteins (alpha and beta) (4)
	All alpha proteins (1)
	Alpha and beta proteins (a+b) (1)

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1 to 8 of 8 Structures

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1HHT \| pdb_00001hht	Download File View File

RNA dependent RNA polymerase from dsRNA bacteriophage phi6 plus template

Grimes, J.M., Butcher, S.J., Makeyev, E.V., Bamford, D.H., Stuart, D.I.

(2001) Nature 410: 235

Released	2001-03-27
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Cystovirus phi6
Macromolecule	P2 PROTEIN (protein) DNA (5'-(TPTPTPCP*C)-3') (nucleic acid)
Unique Ligands	MN

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1HI0 \| pdb_00001hi0	Download File View File

RNA dependent RNA polymerase from dsRNA bacteriophage phi6 plus initiation complex

Grimes, J.M., Butcher, S.J., Makeyev, E.V., Bamford, D.H., Stuart, D.I.

(2001) Nature 410: 235

Released	2001-03-27
Method	X-RAY DIFFRACTION 3 Å
Organisms	Cystovirus phi6
Macromolecule	P2 PROTEIN (protein) DNA (5'-(TPTPTPCP*C)-3') (nucleic acid)
Unique Ligands	GTP, MG, MN

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1HI1 \| pdb_00001hi1	Download File View File

RNA dependent RNA polymerase from dsRNA bacteriophage phi6 plus bound NTP

Grimes, J.M., Butcher, S.J., Makeyev, E.V., Bamford, D.H., Stuart, D.I.

(2001) Nature 410: 235

Released	2001-03-27
Method	X-RAY DIFFRACTION 3 Å
Organisms	Cystovirus phi6
Macromolecule	P2 PROTEIN (protein)
Unique Ligands	ATP

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1HI8 \| pdb_00001hi8	Download File View File

RNA dependent RNA polymerase from dsRNA bacteriophage phi6

Grimes, J.M., Butcher, S.J., Makeyev, E.V., Bamford, D.H., Stuart, D.I.

(2001) Nature 410: 235

Released	2001-03-27
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Cystovirus phi6
Macromolecule	P2 PROTEIN (protein)
Unique Ligands	MG

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1HMJ \| pdb_00001hmj	Download File View File

SOLUTION STRUCTURE OF RNA POLYMERASE SUBUNIT H

Thiru, A., Hodach, M., Eloranta, J., Kostourou, V., Weinzierl, R.

(1999) J Mol Biology 287: 753-760

Released	1999-04-05
Method	SOLUTION NMR
Organisms	Methanocaldococcus jannaschii
Macromolecule	PROTEIN (SUBUNIT H) (protein)

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1QKL \| pdb_00001qkl	Download File View File

hRPABC14.4, essential subunit of human RNA polymerases I, II and III

Del Rio-Portilla, F., Gaskell, A.G., Gilbert, D., Ladias, J.A.A., Wagner, G.

(1999) Nat Struct Biol 6: 1039

Released	1999-11-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	DNA-DIRECTED RNA POLYMERASE II 14.4 KD POLYPEPTIDE (protein)

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5G5L \| pdb_00005g5l	Download File View File

RNA polymerase I-Rrn3 complex at 4.8 A resolution

Engel, C., Plitzko, J., Cramer, P.

(2016) Nat Commun 7: 12129

Released	2016-07-27
Method	ELECTRON MICROSCOPY 4.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Unique protein chains: 15
Unique Ligands	ZN

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2O9L \| pdb_00002o9l	Download File View File

AMBER refined NMR Structure of the Sigma-54 RpoN Domain Bound to the-24 Promoter Element

Doucleff, M., Pelton, J.G., Lee, P.S., Wemmer, D.E.

(2007) J Mol Biology 369: 1070-1078

Released	2007-07-17
Method	SOLUTION NMR
Organisms	Aquifex aeolicus
Macromolecule	RNA polymerase sigma factor RpoN (protein) 5'-D(GPAPAPAPCPGPTPGPCPCPAPAPAPA)-3' (nucleic acid) 5'-D(TPTPTPTPGPGPCPAPCPGPTPTPTPC)-3' (nucleic acid)

1 to 8 of 8 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1HHT | pdb_00001hht

RNA dependent RNA polymerase from dsRNA bacteriophage phi6 plus template

1HI0 | pdb_00001hi0

RNA dependent RNA polymerase from dsRNA bacteriophage phi6 plus initiation complex

1HI1 | pdb_00001hi1

RNA dependent RNA polymerase from dsRNA bacteriophage phi6 plus bound NTP

1HI8 | pdb_00001hi8

RNA dependent RNA polymerase from dsRNA bacteriophage phi6

1HMJ | pdb_00001hmj

SOLUTION STRUCTURE OF RNA POLYMERASE SUBUNIT H

1QKL | pdb_00001qkl

hRPABC14.4, essential subunit of human RNA polymerases I, II and III

5G5L | pdb_00005g5l

RNA polymerase I-Rrn3 complex at 4.8 A resolution

2O9L | pdb_00002o9l

AMBER refined NMR Structure of the Sigma-54 RpoN Domain Bound to the-24 Promoter Element

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1HHT | pdb_00001hht

1HI0 | pdb_00001hi0

1HI1 | pdb_00001hi1

1HI8 | pdb_00001hi8

1HMJ | pdb_00001hmj

1QKL | pdb_00001qkl

5G5L | pdb_00005g5l

2O9L | pdb_00002o9l