RCSB PDB - 3R2Q: Crystal Structure Analysis of yibF from E. Coli

 3R2Q

Crystal Structure Analysis of yibF from E. Coli


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Free:  0.153 (Depositor), 0.160 (DCC) 
  • R-Value Work:  0.140 (DCC) 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 

Created with Raphaël 2.3.0Worse 01 BetterLigand structure goodness of fit to experimental dataBest fitted GSHClick on this verticalbar to view details

This is version 1.0 of the entry. See complete history


Literature

Structural and Functional Genomics of YibF, a Glutathione Transferase Homologue from Escherichia coli

Ladner, J.E.Stournan, N.V.Branch, M.C.Harp, J.Schaab, M.Brown, D.W.Armstrong, R.N.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Uncharacterized GST-like protein yibF202Escherichia coli K-12Mutation(s): 0 
Gene Names: b3592JW3565yibF
UniProt
Find proteins for P0ACA1 (Escherichia coli (strain K12))
Explore P0ACA1 
Go to UniProtKB:  P0ACA1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0ACA1
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Free:  0.153 (Depositor), 0.160 (DCC) 
  • R-Value Work:  0.140 (DCC) 
Space Group: P 43 3 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 111.34α = 90
b = 111.34β = 90
c = 111.34γ = 90
Software Package:
Software NamePurpose
SCALEPACKdata scaling
PHASERphasing
SHELXrefinement
PDB_EXTRACTdata extraction
HKL-2000data reduction
ARP/wARPmodel building
SHELXL-97refinement

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 

Created with Raphaël 2.3.0Worse 01 BetterLigand structure goodness of fit to experimental dataBest fitted GSHClick on this verticalbar to view details

Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2012-03-14
    Type: Initial release