Crystallographic Fragment Screening of an Entire Library
Schiebel, J., Heine, A., Klebe, G.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Endothiapepsin | 330 | Cryphonectria parasitica | Mutation(s): 0  EC: 3.4.23.22 | ||
UniProt | |||||
Find proteins for P11838 (Cryphonectria parasitica) Explore P11838  Go to UniProtKB:  P11838 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P11838 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
46O Query on 46O | E [auth A], F [auth A] | (2R)-2-(2,3-dihydro-1,4-benzodioxin-6-yl)pyrrolidine C12 H15 N O2 LSNPFVDQLTUQCE-SNVBAGLBSA-N | |||
GOL Query on GOL | C [auth A], D [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
DMS Query on DMS | I [auth A] | DIMETHYL SULFOXIDE C2 H6 O S IAZDPXIOMUYVGZ-UHFFFAOYSA-N | |||
EDO Query on EDO | B [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
ACT Query on ACT | G [auth A], H [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 45.359 | α = 90 |
b = 72.846 | β = 109.56 |
c = 52.755 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
PHASER | phasing |
Coot | model building |
XDS | data scaling |
Funding Organization | Location | Grant Number |
---|---|---|
BMBF | Germany | 05K13RM1 |