8V2C

Cryo-EM structure of mouse type II OSM receptor complex: model for assembly core region


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.46 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


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Literature

Structures of complete extracellular assemblies of type I and type II Oncostatin M receptor complexes.

Zhou, Y.Stevis, P.E.Cao, J.Ehrlich, G.Jones, J.Rafique, A.Sleeman, M.W.Olson, W.C.Franklin, M.C.

(2024) Nat Commun 15: 9776-9776

  • DOI: https://doi.org/10.1038/s41467-024-54124-1
  • Primary Citation of Related Structures:  
    8V29, 8V2A, 8V2B, 8V2C

  • PubMed Abstract: 

    Oncostatin M (OSM) is a unique Interleukin 6 (IL-6) family cytokine that plays pivotal roles in numerous biological events by signaling via two types of receptor complexes. While type I OSM receptor complex is formed by glycoprotein 130 (gp130) heterodimerization with Leukemia Inhibitory Factor receptor (LIFR), type II OSM receptor complex is composed of gp130 and OSM receptor (OSMR). OSM is an important contributor to multiple inflammatory diseases and cancers while OSM inhibition has been shown to be effective at reducing symptoms, making OSM an attractive therapeutic target. Using cryogenic electron microscopy (cryo-EM), we characterize full extracellular assemblies of human type I OSM receptor complex and mouse type II OSM receptor complex. The juxtamembrane domains of both complexes are situated in close proximity due to acute bends of the receptors. The rigid N-terminal extension of OSM contributes to gp130 binding and OSM signaling. Neither glycosylation nor pro-domain cleavage of OSM affects its activity. Mutagenesis identifies multiple OSM and OSMR residues crucial for complex formation and signaling. Our data reveal the structural basis for the assemblies of both type I and type II OSM receptor complexes and provide insights for modulation of OSM signaling in therapeutics.


  • Organizational Affiliation

    Regeneron Pharmaceuticals, Inc., Tarrytown, NY, 10591, USA. yi.zhou@regeneron.com.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Oncostatin-M183Mus musculusMutation(s): 0 
Gene Names: Osm
UniProt & NIH Common Fund Data Resources
Find proteins for P53347 (Mus musculus)
Explore P53347 
Go to UniProtKB:  P53347
IMPC:  MGI:104749
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP53347
Sequence Annotations
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Interleukin-6 receptor subunit beta623Mus musculusMutation(s): 0 
Gene Names: Il6st
UniProt & NIH Common Fund Data Resources
Find proteins for Q00560 (Mus musculus)
Explore Q00560 
Go to UniProtKB:  Q00560
IMPC:  MGI:96560
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ00560
Glycosylation
Glycosylation Sites: 3Go to GlyGen: Q00560-1
Sequence Annotations
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  • Reference Sequence
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Oncostatin-M-specific receptor subunit beta715Mus musculusMutation(s): 0 
Gene Names: Osmr
UniProt
Find proteins for O70458 (Mus musculus)
Explore O70458 
Go to UniProtKB:  O70458
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO70458
Glycosylation
Glycosylation Sites: 5Go to GlyGen: O70458-1
Sequence Annotations
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  • Reference Sequence
Oligosaccharides

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Entity ID: 4
MoleculeChains Length2D Diagram Glycosylation3D Interactions
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
D, E, F, G, H
2N-Glycosylation
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.46 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


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Revision History  (Full details and data files)

  • Version 1.0: 2024-11-20
    Type: Initial release