9LI7 | pdb_00009li7

Structure of ABCC2(E1404Q) in Arabidopsis thaliana in the apo state

PDB DOI: https://doi.org/10.2210/pdb9LI7/pdb
EM Map EMD-63113: EMDB EMDataResource

Classification: TRANSPORT PROTEIN
Organism(s): Arabidopsis thaliana
Expression System: Homo sapiens
Mutation(s): Yes

Deposited: 2025-01-13 Released: 2025-12-24
Deposition Author(s): Sun, L., Liu, X., Yang, Z., Gao, Y., Qiu, X.
Funding Organization(s): National Science Foundation (NSF, China)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Structure of ABCC2(E1404Q) in Arabidopsis thaliana in the apo state

Sun, L., Liu, X., Yang, Z., Gao, Y., Qiu, X.

To be published.

Macromolecule Content

Total Structure Weight: 364.62 kDa
Atom Count: 21,352
Modeled Residue Count: 2,702
Deposited Residue Count: 3,246
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
ABC transporter C family member 2	A, B	1,623	Arabidopsis thaliana	Mutation(s): 1 Gene Names: ABCC2, EST4, MRP2, At2g34660, T29F13.13 EC: 7.6.2.2
UniProt
Find proteins for Q42093 (Arabidopsis thaliana) Explore Q42093 Go to UniProtKB: Q42093
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q42093
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX	1.13_2998:
RECONSTRUCTION	cryoSPARC

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2025-12-24

Deposition Author(s):

Funding Organization	Location	Grant Number
National Science Foundation (NSF, China)	China	32322041, 32321001, 31900885

Revision History (Full details and data files)

Version 1.0: 2025-12-24
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.