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 9SXK | pdb_00009sxk

Structural characterization of hibernating ribosomes in the Gram-negative pathogen Klebsiella quasipneumoniae


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.30 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SINGLE PARTICLE 

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.0 of the entry. See complete history. 

Literature

Macromolecule Content 

  • Total Structure Weight: 2,169.19 kDa 
  • Atom Count: 143,298 
  • Modeled Residue Count: 10,294 
  • Deposited Residue Count: 10,530 
  • Unique protein chains: 49
  • Unique nucleic acid chains: 4

Macromolecules


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Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL33A [auth 0]55Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EU29 (Klebsiella quasipneumoniae)
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Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL34B [auth 1]46Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EMK5 (Klebsiella quasipneumoniae)
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Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL35C [auth 2]65Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1F538 (Klebsiella quasipneumoniae)
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Entity ID: 4
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL36D [auth 3]38Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A232GHB6 (Klebsiella quasipneumoniae)
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Entity ID: 5
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL31E [auth 4]70Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EMQ7 (Klebsiella quasipneumoniae)
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Entity ID: 7
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS2G [auth B]241Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A0J4NKZ0 (Klebsiella quasipneumoniae)
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Entity ID: 8
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS3H [auth C]232Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 9
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS4I [auth D]206Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EH41 (Klebsiella quasipneumoniae)
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Entity ID: 10
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS5J [auth E]167Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EGY3 (Klebsiella quasipneumoniae)
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Entity ID: 11
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS6K [auth F]131Klebsiella quasipneumoniaeMutation(s): 1 
UniProt
Find proteins for A0A2N4W582 (Klebsiella quasipneumoniae)
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Entity ID: 12
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS7L [auth G]156Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EPQ6 (Klebsiella quasipneumoniae)
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Entity ID: 13
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS8M [auth H]130Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EH69 (Klebsiella quasipneumoniae)
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Entity ID: 14
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS9N [auth I]130Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 15
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS10O [auth J]103Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 16
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS11P [auth K]129Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 17
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS12Q [auth L]124Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 18
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS13R [auth M]118Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 19
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS14S [auth N]101Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EH51 (Klebsiella quasipneumoniae)
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Entity ID: 20
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS15T [auth O]89Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EXP1 (Klebsiella quasipneumoniae)
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Entity ID: 21
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS16U [auth P]82Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1ENI5 (Klebsiella quasipneumoniae)
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Entity ID: 22
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS17V [auth Q]84Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EGD4 (Klebsiella quasipneumoniae)
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Entity ID: 23
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS18W [auth R]75Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EWQ2 (Klebsiella quasipneumoniae)
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Entity ID: 24
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS19X [auth S]92Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EH79 (Klebsiella quasipneumoniae)
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Entity ID: 25
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS20Y [auth T]87Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EVZ6 (Klebsiella quasipneumoniae)
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Entity ID: 27
MoleculeChains  Sequence LengthOrganismDetailsImage
Ribosomal subunit interface proteinAA [auth X]111Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 30
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL2DA [auth c]273Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EH64 (Klebsiella quasipneumoniae)
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Entity ID: 31
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL3EA [auth d]209Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EGI1 (Klebsiella quasipneumoniae)
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Entity ID: 32
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL4FA [auth e]201Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 33
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL5GA [auth f]179Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 34
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL6HA [auth g]177Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 35
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL9IA [auth h]149Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 36
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL13JA [auth i]142Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 37
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL14KA [auth j]123Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 38
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL15LA [auth k]144Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 39
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL16MA [auth l]136Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 40
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL17NA [auth m]128Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 41
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL18OA [auth n]117Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 42
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL19PA [auth o]115Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 43
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL20QA [auth p]118Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 44
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL21RA [auth q]103Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 45
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL22SA [auth r]110Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 46
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL23TA [auth s]100Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 47
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL24UA [auth t]104Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 48
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL25VA [auth u]94Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
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Entity ID: 49
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL27WA [auth v]85Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EXJ0 (Klebsiella quasipneumoniae)
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UniProt GroupA0A1C1EXJ0
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Entity ID: 50
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL28XA [auth w]78Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1ETB7 (Klebsiella quasipneumoniae)
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UniProt GroupA0A1C1ETB7
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Entity ID: 51
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL29YA [auth x]63Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EH08 (Klebsiella quasipneumoniae)
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UniProt GroupA0A1C1EH08
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Entity ID: 52
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL30ZA [auth y]59Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1EGZ9 (Klebsiella quasipneumoniae)
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Entity ID: 53
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL32AB [auth z]57Klebsiella quasipneumoniaeMutation(s): 0 
UniProt
Find proteins for A0A1C1F1Q4 (Klebsiella quasipneumoniae)
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Entity ID: 6
MoleculeChains LengthOrganismImage
16s rRNA (1538-MER)F [auth A]1,550Klebsiella quasipneumoniae
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Entity ID: 26
MoleculeChains LengthOrganismImage
non-STOP mRNAZ [auth W]15Escherichia coli
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Entity ID: 28
MoleculeChains LengthOrganismImage
23S rRNA (2901-MER)BA [auth a]2,923Klebsiella quasipneumoniae
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Entity ID: 29
MoleculeChains LengthOrganismImage
5S rRNA (119-MER)CA [auth b]116Klebsiella quasipneumoniae
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Reference Sequence

Small Molecules

Ligands 3 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
ZN

Query on ZN



Download:Ideal Coordinates CCD File
BB [auth 3],
CB [auth 4]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
K

Query on K



Download:Ideal Coordinates CCD File
AF [auth A]
AG [auth A]
AR [auth a]
AS [auth a]
AT [auth a]
AF [auth A],
AG [auth A],
AR [auth a],
AS [auth a],
AT [auth a],
AU [auth a],
BF [auth A],
BG [auth A],
BR [auth a],
BS [auth a],
BT [auth a],
BU [auth a],
BV [auth c],
CF [auth A],
CG [auth A],
CR [auth a],
CS [auth a],
CT [auth a],
CU [auth a],
CV [auth c],
DF [auth A],
DG [auth A],
DR [auth a],
DS [auth a],
DT [auth a],
DU [auth a],
DV [auth c],
EF [auth A],
EG [auth A],
ER [auth a],
ES [auth a],
ET [auth a],
EU [auth a],
EV [auth c],
FF [auth A],
FG [auth A],
FR [auth a],
FS [auth a],
FT [auth a],
FU [auth a],
GF [auth A],
GG [auth A],
GR [auth a],
GS [auth a],
GT [auth a],
GU [auth a],
GV [auth d],
HF [auth A],
HG [auth A],
HQ [auth a],
HR [auth a],
HS [auth a],
HT [auth a],
HU [auth a],
HV [auth e],
IF [auth A],
IG [auth A],
IQ [auth a],
IR [auth a],
IS [auth a],
IT [auth a],
IU [auth a],
IV [auth f],
JF [auth A],
JG [auth A],
JQ [auth a],
JR [auth a],
JS [auth a],
JT [auth a],
JU [auth a],
KF [auth A],
KG [auth A],
KQ [auth a],
KR [auth a],
KS [auth a],
KT [auth a],
KU [auth a],
LF [auth A],
LG [auth A],
LQ [auth a],
LR [auth a],
LS [auth a],
LT [auth a],
LU [auth a],
MF [auth A],
MG [auth A],
MQ [auth a],
MR [auth a],
MS [auth a],
MT [auth a],
MU [auth a],
NF [auth A],
NQ [auth a],
NR [auth a],
NS [auth a],
NT [auth a],
NU [auth a],
OF [auth A],
OG [auth A],
OQ [auth a],
OR [auth a],
OS [auth a],
OT [auth a],
OU [auth a],
PF [auth A],
PQ [auth a],
PR [auth a],
PS [auth a],
PT [auth a],
PU [auth a],
QF [auth A],
QQ [auth a],
QR [auth a],
QS [auth a],
QT [auth a],
RF [auth A],
RQ [auth a],
RR [auth a],
RS [auth a],
RT [auth a],
RU [auth a],
SF [auth A],
SQ [auth a],
SR [auth a],
SS [auth a],
ST [auth a],
TE [auth A],
TF [auth A],
TQ [auth a],
TR [auth a],
TS [auth a],
TT [auth a],
UE [auth A],
UF [auth A],
UQ [auth a],
UR [auth a],
US [auth a],
UT [auth a],
VE [auth A],
VF [auth A],
VQ [auth a],
VR [auth a],
VS [auth a],
VT [auth a],
WE [auth A],
WF [auth A],
WQ [auth a],
WR [auth a],
WS [auth a],
WT [auth a],
XE [auth A],
XF [auth A],
XQ [auth a],
XR [auth a],
XS [auth a],
XT [auth a],
YE [auth A],
YF [auth A],
YQ [auth a],
YR [auth a],
YS [auth a],
YT [auth a],
ZE [auth A],
ZF [auth A],
ZQ [auth a],
ZR [auth a],
ZS [auth a],
ZT [auth a],
ZU [auth b]
POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
MG

Query on MG



Download:Ideal Coordinates CCD File
AC [auth A]
AD [auth A]
AE [auth A]
AH [auth a]
AI [auth a]
AC [auth A],
AD [auth A],
AE [auth A],
AH [auth a],
AI [auth a],
AJ [auth a],
AK [auth a],
AL [auth a],
AM [auth a],
AN [auth a],
AO [auth a],
AP [auth a],
AQ [auth a],
AV [auth c],
BC [auth A],
BD [auth A],
BE [auth A],
BH [auth a],
BI [auth a],
BJ [auth a],
BK [auth a],
BL [auth a],
BM [auth a],
BN [auth a],
BO [auth a],
BP [auth a],
BQ [auth a],
CC [auth A],
CD [auth A],
CE [auth A],
CH [auth a],
CI [auth a],
CJ [auth a],
CK [auth a],
CL [auth a],
CM [auth a],
CN [auth a],
CO [auth a],
CP [auth a],
CQ [auth a],
DB [auth A],
DC [auth A],
DD [auth A],
DE [auth A],
DH [auth a],
DI [auth a],
DJ [auth a],
DK [auth a],
DL [auth a],
DM [auth a],
DN [auth a],
DO [auth a],
DP [auth a],
DQ [auth a],
EB [auth A],
EC [auth A],
ED [auth A],
EE [auth A],
EH [auth a],
EI [auth a],
EJ [auth a],
EK [auth a],
EL [auth a],
EM [auth a],
EN [auth a],
EO [auth a],
EP [auth a],
EQ [auth a],
FB [auth A],
FC [auth A],
FD [auth A],
FE [auth A],
FH [auth a],
FI [auth a],
FJ [auth a],
FK [auth a],
FL [auth a],
FM [auth a],
FN [auth a],
FO [auth a],
FP [auth a],
FQ [auth a],
FV [auth d],
GB [auth A],
GC [auth A],
GD [auth A],
GE [auth A],
GH [auth a],
GI [auth a],
GJ [auth a],
GK [auth a],
GL [auth a],
GM [auth a],
GN [auth a],
GO [auth a],
GP [auth a],
GQ [auth a],
HB [auth A],
HC [auth A],
HD [auth A],
HE [auth A],
HH [auth a],
HI [auth a],
HJ [auth a],
HK [auth a],
HL [auth a],
HM [auth a],
HN [auth a],
HO [auth a],
HP [auth a],
IB [auth A],
IC [auth A],
ID [auth A],
IE [auth A],
IH [auth a],
II [auth a],
IJ [auth a],
IK [auth a],
IL [auth a],
IM [auth a],
IN [auth a],
IO [auth a],
IP [auth a],
JB [auth A],
JC [auth A],
JD [auth A],
JE [auth A],
JH [auth a],
JI [auth a],
JJ [auth a],
JK [auth a],
JL [auth a],
JM [auth a],
JN [auth a],
JO [auth a],
JP [auth a],
JV [auth p],
KB [auth A],
KC [auth A],
KD [auth A],
KE [auth A],
KH [auth a],
KI [auth a],
KJ [auth a],
KK [auth a],
KL [auth a],
KM [auth a],
KN [auth a],
KO [auth a],
KP [auth a],
KV [auth z],
LB [auth A],
LC [auth A],
LD [auth A],
LE [auth A],
LH [auth a],
LI [auth a],
LJ [auth a],
LK [auth a],
LL [auth a],
LM [auth a],
LN [auth a],
LO [auth a],
LP [auth a],
MB [auth A],
MC [auth A],
MD [auth A],
ME [auth A],
MH [auth a],
MI [auth a],
MJ [auth a],
MK [auth a],
ML [auth a],
MM [auth a],
MN [auth a],
MO [auth a],
MP [auth a],
NB [auth A],
NC [auth A],
ND [auth A],
NE [auth A],
NG [auth A],
NH [auth a],
NI [auth a],
NJ [auth a],
NK [auth a],
NL [auth a],
NM [auth a],
NN [auth a],
NO [auth a],
NP [auth a],
OB [auth A],
OC [auth A],
OD [auth A],
OE [auth A],
OH [auth a],
OI [auth a],
OJ [auth a],
OK [auth a],
OL [auth a],
OM [auth a],
ON [auth a],
OO [auth a],
OP [auth a],
PB [auth A],
PC [auth A],
PD [auth A],
PE [auth A],
PG [auth E],
PH [auth a],
PI [auth a],
PJ [auth a],
PK [auth a],
PL [auth a],
PM [auth a],
PN [auth a],
PO [auth a],
PP [auth a],
QB [auth A],
QC [auth A],
QD [auth A],
QE [auth A],
QG [auth a],
QH [auth a],
QI [auth a],
QJ [auth a],
QK [auth a],
QL [auth a],
QM [auth a],
QN [auth a],
QO [auth a],
QP [auth a],
QU [auth a],
RB [auth A],
RC [auth A],
RD [auth A],
RE [auth A],
RG [auth a],
RH [auth a],
RI [auth a],
RJ [auth a],
RK [auth a],
RL [auth a],
RM [auth a],
RN [auth a],
RO [auth a],
RP [auth a],
SB [auth A],
SC [auth A],
SD [auth A],
SE [auth A],
SG [auth a],
SH [auth a],
SI [auth a],
SJ [auth a],
SK [auth a],
SL [auth a],
SM [auth a],
SN [auth a],
SO [auth a],
SP [auth a],
SU [auth a],
TB [auth A],
TC [auth A],
TD [auth A],
TG [auth a],
TH [auth a],
TI [auth a],
TJ [auth a],
TK [auth a],
TL [auth a],
TM [auth a],
TN [auth a],
TO [auth a],
TP [auth a],
TU [auth a],
UB [auth A],
UC [auth A],
UD [auth A],
UG [auth a],
UH [auth a],
UI [auth a],
UJ [auth a],
UK [auth a],
UL [auth a],
UM [auth a],
UN [auth a],
UO [auth a],
UP [auth a],
UU [auth b],
VB [auth A],
VC [auth A],
VD [auth A],
VG [auth a],
VH [auth a],
VI [auth a],
VJ [auth a],
VK [auth a],
VL [auth a],
VM [auth a],
VN [auth a],
VO [auth a],
VP [auth a],
VU [auth b],
WB [auth A],
WC [auth A],
WD [auth A],
WG [auth a],
WH [auth a],
WI [auth a],
WJ [auth a],
WK [auth a],
WL [auth a],
WM [auth a],
WN [auth a],
WO [auth a],
WP [auth a],
WU [auth b],
XB [auth A],
XC [auth A],
XD [auth A],
XG [auth a],
XH [auth a],
XI [auth a],
XJ [auth a],
XK [auth a],
XL [auth a],
XM [auth a],
XN [auth a],
XO [auth a],
XP [auth a],
XU [auth b],
YB [auth A],
YC [auth A],
YD [auth A],
YG [auth a],
YH [auth a],
YI [auth a],
YJ [auth a],
YK [auth a],
YL [auth a],
YM [auth a],
YN [auth a],
YO [auth a],
YP [auth a],
YU [auth b],
ZB [auth A],
ZC [auth A],
ZD [auth A],
ZG [auth a],
ZH [auth a],
ZI [auth a],
ZJ [auth a],
ZK [auth a],
ZL [auth a],
ZM [auth a],
ZN [auth a],
ZO [auth a],
ZP [auth a]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Modified Residues  3 Unique
IDChains Modified ResidueModification TypeFormula2D Diagram
D2T
Query on D2T
ASPMethylsulfanylationC5 H9 N O4 S
MEQ
Query on MEQ
GLNMethylationC6 H12 N2 O3
4D4
Query on 4D4
ARGHydroxylationC6 H14 N4 O3
Non-standard Monomers  2 Unique
IDChains TypeFormula2D Diagram
HSE
Query on HSE
L-PEPTIDE LINKINGC4 H9 N O3
MS6
Query on MS6
L-PEPTIDE LINKINGC5 H11 N O S2

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.30 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC4.3.1
RECONSTRUCTIONPHENIX1.21.2-5419
RECONSTRUCTIONCoot0.9.8.95
MODEL REFINEMENTPHENIX1.21.2-5419

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Agence Nationale de la Recherche (ANR)FranceANR-23-CE18-0031-01
Fondation pour la Recherche Medicale (FRM)FranceEQU202203014663
iNEXTEuropean UnionPID 27112

Revision History  (Full details and data files)

  • Version 1.0: 2026-10-28
    Type: Initial release