7E82
Cryo-EM structure of the flagellar rod with partial hook from Salmonella
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
EB [auth DA] | SCOP2B Superfamily | Flagellar hook protein flgE | 8043628 | 3000296 | SCOP2B (2022-06-29) |
FB [auth DB] | SCOP2B Superfamily | Flagellar hook protein flgE | 8043628 | 3000296 | SCOP2B (2022-06-29) |
GB [auth DC] | SCOP2B Superfamily | Flagellar hook protein flgE | 8043628 | 3000296 | SCOP2B (2022-06-29) |
JB [auth DF] | SCOP2B Superfamily | Flagellar hook protein flgE | 8043628 | 3000296 | SCOP2B (2022-06-29) |
KB [auth DG] | SCOP2B Superfamily | Flagellar hook protein flgE | 8043628 | 3000296 | SCOP2B (2022-06-29) |
LB [auth DH] | SCOP2B Superfamily | Flagellar hook protein flgE | 8043628 | 3000296 | SCOP2B (2022-06-29) |
NB [auth DJ] | SCOP2B Superfamily | Flagellar hook protein flgE | 8043628 | 3000296 | SCOP2B (2022-06-29) |
OB [auth DK] | SCOP2B Superfamily | Flagellar hook protein flgE | 8043628 | 3000296 | SCOP2B (2022-06-29) |
HB [auth DD] | SCOP2B Superfamily | Flagellar hook protein flgE | 8043628 | 3000296 | SCOP2B (2022-06-29) |
IB [auth DE] | SCOP2B Superfamily | Flagellar hook protein flgE | 8043628 | 3000296 | SCOP2B (2022-06-29) |
MB [auth DI] | SCOP2B Superfamily | Flagellar hook protein flgE | 8043628 | 3000296 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | flgG | e7e82A1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
A | Flg_bb_rod | e7e82A2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
B | flgG | e7e82B1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
B | Flg_bb_rod | e7e82B2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
C | flgG | e7e82C1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
C | Flg_bb_rod | e7e82C2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
D | flgG | e7e82D1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
D | Flg_bb_rod | e7e82D2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
E | flgG | e7e82E1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
E | Flg_bb_rod | e7e82E2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
G | flgG | e7e82G1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
G | Flg_bb_rod | e7e82G2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
H | flgG | e7e82H1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
H | Flg_bb_rod | e7e82H2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
K | flgG | e7e82K1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
K | Flg_bb_rod | e7e82K2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
L | flgG | e7e82L1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
L | Flg_bb_rod | e7e82L2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
M | flgG | e7e82M1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
M | Flg_bb_rod | e7e82M2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
N | flgG | e7e82N1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
N | Flg_bb_rod | e7e82N2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
O | flgG | e7e82O1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
O | Flg_bb_rod | e7e82O2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
R | flgG | e7e82R1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
R | Flg_bb_rod | e7e82R2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
S | flgG | e7e82S1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
S | Flg_bb_rod | e7e82S2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
T | flgG | e7e82T1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
T | Flg_bb_rod | e7e82T2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
U | flgG | e7e82U1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
U | Flg_bb_rod | e7e82U2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
VA [auth V] | flgG | e7e82V1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
VA [auth V] | Flg_bb_rod | e7e82V2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
WA [auth W] | flgG | e7e82W1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
WA [auth W] | Flg_bb_rod | e7e82W2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
F | flgG | e7e82F1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
F | Flg_bb_rod | e7e82F2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
I | flgG | e7e82I1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
I | Flg_bb_rod | e7e82I2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
J | flgG | e7e82J1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
J | Flg_bb_rod | e7e82J2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
P | flgG | e7e82P1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
P | Flg_bb_rod | e7e82P2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
Q | flgG | e7e82Q1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
Q | Flg_bb_rod | e7e82Q2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
XA [auth X] | flgG | e7e82X1 | A: beta complex topology | X: Flagellar hook protein flgE D1 domain (From Topology) | H: Flagellar hook protein flgE D1 domain (From Topology) | T: Flagellar hook protein flgE D1 domain | F: flgG | ECOD (1.6) |
XA [auth X] | Flg_bb_rod | e7e82X2 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
KA [auth g] | F_UNCLASSIFIED | e7e82g1 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: F_UNCLASSIFIED | ECOD (1.6) |
LA [auth h] | F_UNCLASSIFIED | e7e82h1 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: F_UNCLASSIFIED | ECOD (1.6) |
MA [auth j] | F_UNCLASSIFIED | e7e82j1 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: F_UNCLASSIFIED | ECOD (1.6) |
SA [auth i] | F_UNCLASSIFIED | e7e82i1 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: F_UNCLASSIFIED | ECOD (1.6) |
JA [auth f] | F_UNCLASSIFIED | e7e82f1 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: F_UNCLASSIFIED | ECOD (1.6) |
QA [auth p] | F_UNCLASSIFIED | e7e82p1 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: F_UNCLASSIFIED | ECOD (1.6) |
OA [auth m] | Flg_bb_rod | e7e82m1 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
NA [auth l] | Flg_bb_rod | e7e82l1 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
PA [auth o] | Flg_bb_rod | e7e82o1 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
TA [auth k] | Flg_bb_rod | e7e82k1 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
UA [auth n] | Flg_bb_rod | e7e82n1 | A: a+b two layers | X: Flagellar hook protein FlgE D0 domain (From Topology) | H: Flagellar hook protein FlgE D0 domain (From Topology) | T: Flagellar hook protein FlgE D0 domain | F: Flg_bb_rod | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00460 | Flagella basal body rod protein (Flg_bb_rod) | Flagella basal body rod protein | - | Family | |
PF06429 | Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C) | Flagellar basal body rod FlgEFG protein C-terminal | This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus. | Domain | |
V [auth a], W [auth b], X [auth c], Y [auth d], Z [auth e] | PF00460 | Flagella basal body rod protein (Flg_bb_rod) | Flagella basal body rod protein | - | Family |
V [auth a], W [auth b], X [auth c], Y [auth d], Z [auth e] | PF06429 | Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C) | Flagellar basal body rod FlgEFG protein C-terminal | This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus. | Domain |
FA [auth 5], GA [auth 6], HA [auth 7], IA [auth 9], RA [auth 8] | PF08345 | Flagellar M-ring protein C-terminal (YscJ_FliF_C) | Flagellar M-ring protein C-terminal | - | Family |
PF00460 | Flagella basal body rod protein (Flg_bb_rod) | Flagella basal body rod protein | - | Family | |
PF06429 | Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C) | Flagellar basal body rod FlgEFG protein C-terminal | This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus. | Domain | |
NA [auth l], OA [auth m], PA [auth o], TA [auth k], UA [auth n] | PF00460 | Flagella basal body rod protein (Flg_bb_rod) | Flagella basal body rod protein | - | Family |
PF02049 | Flagellar hook-basal body complex protein FliE (FliE) | Flagellar hook-basal body complex protein FliE | - | Family | |
PF00460 | Flagella basal body rod protein (Flg_bb_rod) | Flagella basal body rod protein | - | Family | |
PF06429 | Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C) | Flagellar basal body rod FlgEFG protein C-terminal | This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus. | Domain | |
PF07559 | Flagellar basal body protein FlaE (FlaE) | Flagellar basal body protein FlaE | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Flagellar basal-body rod protein FlgG | - | |||
V [auth a], W [auth b], X [auth c], Y [auth d], Z [auth e] | Flagellar basal-body rod protein FlgF | - | ||
AA [auth 0], BA [auth 1], CA [auth 2], DA [auth 3], EA [auth 4] | Flagellar MS ring L2 | - | - | - |
FA [auth 5], GA [auth 6], HA [auth 7], IA [auth 9], RA [auth 8] | Flagellar MS ring L1 | |||
Flagellar basal-body rod protein FlgC | - | |||
NA [auth l], OA [auth m], PA [auth o], TA [auth k], UA [auth n] | Flagellar basal body rod protein FlgB | - | ||
Flagellar hook-basal body complex protein FliE | ||||
Flagellar hook protein FlgE | - |