Annotations: 1A6C

STRUCTURE OF TOBACCO RINGSPOT VIRUS

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1a6ca1	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Positive stranded ssRNA viruses	Comoviridae-like VP	Nepovirus capsid protein	(Tobacco ringspot virus ) [TaxId: 12282 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Comoviridae-like VP	8028414	4003469	SCOP2 (2022-06-29)
A	SCOP2 Family	Comoviridae-like VP	8028417	4003469	SCOP2 (2022-06-29)
A	SCOP2 Family	Comoviridae-like VP	8028419	4003469	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Positive stranded ssRNA viruses-like	8040793	3000918	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Positive stranded ssRNA viruses-like	8040796	3000918	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Positive stranded ssRNA viruses-like	8040798	3000918	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Nepo_coat_N	e1a6cA1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: Nepo_coat_N	ECOD (v294.2)
A	Nepo_coat	e1a6cA2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: Nepo_coat	ECOD (v294.2)
A	Nepo_coat_C	e1a6cA3	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: Nepo_coat_C	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	TOBACCO RINGSPOT VIRUS CAPSID PROTEIN	structural molecule activity	-	viral capsid virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR029053	Viral coat protein subunit	Homologous Superfamily
A	IPR005306	Nepovirus coat protein, N-terminal	Domain
A	IPR005305	Nepovirus coat protein, C-terminal	Domain
A	IPR005054	Nepovirus coat protein	Domain

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