1BGS | pdb_00001bgs

RECOGNITION BETWEEN A BACTERIAL RIBONUCLEASE, BARNASE, AND ITS NATURAL INHIBITOR, BARSTAR

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D [auth E]	d1bgse_	Alpha and beta proteins (a/b)	Barstar-like	Barstar-related	Barstar-related	Barstar (barnase inhibitor)	(Bacillus amyloliquefaciens ) [TaxId: 1390 ],	SCOPe (2.08)
E [auth F]	d1bgsf_	Alpha and beta proteins (a/b)	Barstar-like	Barstar-related	Barstar-related	Barstar (barnase inhibitor)	(Bacillus amyloliquefaciens ) [TaxId: 1390 ],	SCOPe (2.08)
F [auth G]	d1bgsg_	Alpha and beta proteins (a/b)	Barstar-like	Barstar-related	Barstar-related	Barstar (barnase inhibitor)	(Bacillus amyloliquefaciens ) [TaxId: 1390 ],	SCOPe (2.08)
A	d1bgsa_	Alpha and beta proteins (a+b)	Microbial ribonucleases	Microbial ribonucleases	Bacterial ribonucleases	Barnase	(Bacillus amyloliquefaciens ) [TaxId: 1390 ],	SCOPe (2.08)
C	d1bgsc_	Alpha and beta proteins (a+b)	Microbial ribonucleases	Microbial ribonucleases	Bacterial ribonucleases	Barnase	(Bacillus amyloliquefaciens ) [TaxId: 1390 ],	SCOPe (2.08)
B	d1bgsb_	Alpha and beta proteins (a+b)	Microbial ribonucleases	Microbial ribonucleases	Bacterial ribonucleases	Barnase	(Bacillus amyloliquefaciens ) [TaxId: 1390 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D [auth E]	SCOP2B Superfamily	Barstar-related	8043969	3000977	SCOP2B (2022-06-29)
E [auth F]	SCOP2B Superfamily	Barstar-related	8043969	3000977	SCOP2B (2022-06-29)
F [auth G]	SCOP2B Superfamily	Barstar-related	8043969	3000977	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Microbial ribonucleases	8033554	3001847	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Microbial ribonucleases	8033554	3001847	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Microbial ribonucleases	8033554	3001847	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth E]		e1bgsE1	A: HTH	X: HTH	H: winged helix domain	T: EF-hand_1, EF-hand_7	F:	ECOD (20:10:01)
E [auth F]		e1bgsF1	A: HTH	X: HTH	H: winged helix domain	T: EF-hand_1, EF-hand_7	F:	ECOD (20:10:01)
F [auth G]		e1bgsG1	A: HTH	X: HTH	H: winged helix domain	T: EF-hand_1, EF-hand_7	F:	ECOD (20:10:01)
A		e1bgsA1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: DUF3197	F:	ECOD (20:10:01)
C		e1bgsC1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: DUF3197	F:	ECOD (20:10:01)
B		e1bgsB1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: DUF3197	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D [auth E]	3.30.370.10	Alpha Beta	2-Layer Sandwich	Barnase	Chain D	CATH (4.3.0)
E [auth F]	3.30.370.10	Alpha Beta	2-Layer Sandwich	Barnase	Chain D	CATH (4.3.0)
F [auth G]	3.30.370.10	Alpha Beta	2-Layer Sandwich	Barnase	Chain D	CATH (4.3.0)
A	3.10.450.30	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
C	3.10.450.30	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
B	3.10.450.30	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth E], E [auth F], F [auth G]	BARSTAR	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm
A, B, C	BARNASE	endonuclease activity nuclease activity catalytic activity, acting on RNA RNA endonuclease activity catalytic activity, acting on a nucleic acid RNA nuclease activity catalytic activity hydrolase activity RNA binding binding nucleic acid binding	-	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D [auth E], E [auth F], F [auth G]	IPR000468	Barstar (barnase inhibitor)	Domain
D [auth E], E [auth F], F [auth G]	IPR035905	Barstar-like superfamily	Homologous Superfamily
A, B, C	IPR000026	Guanine-specific ribonuclease N1-like	Family
A, B, C	IPR053753	Ribonuclease N1/T1-like	Homologous Superfamily
A, B, C	IPR001887	Barnase	Family
A, B, C	IPR016191	Ribonuclease/ribotoxin	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.