1DBX
Crystal structure of cysteinyl-tRNA(Pro) deacylase from H. influenzae (HI1434)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1dbxa_ | Alpha and beta proteins (a+b) | YbaK/ProRS associated domain | YbaK/ProRS associated domain | YbaK/ProRS associated domain | Hypothetical protein HI1434 (YbaK homologue) | (Haemophilus influenzae ) [TaxId: 727 ], | SCOPe (2.08) |
B | d1dbxb_ | Alpha and beta proteins (a+b) | YbaK/ProRS associated domain | YbaK/ProRS associated domain | YbaK/ProRS associated domain | Hypothetical protein HI1434 (YbaK homologue) | (Haemophilus influenzae ) [TaxId: 727 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | tRNA_edit | e1dbxA1 | A: a+b complex topology | X: YbaK/ProRS associated domain (From Topology) | H: YbaK/ProRS associated domain (From Topology) | T: YbaK/ProRS associated domain | F: tRNA_edit | ECOD (1.6) |
B | tRNA_edit | e1dbxB1 | A: a+b complex topology | X: YbaK/ProRS associated domain (From Topology) | H: YbaK/ProRS associated domain (From Topology) | T: YbaK/ProRS associated domain | F: tRNA_edit | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.960.10 | Alpha Beta | Alpha-Beta Complex | YbaK protein | YbaK/aminoacyl-tRNA synthetase-associated domain | CATH (4.3.0) |
B | 3.90.960.10 | Alpha Beta | Alpha-Beta Complex | YbaK protein | YbaK/aminoacyl-tRNA synthetase-associated domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
cysteinyl-tRNA(Pro) deacylase |
|
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007214 | YbaK/aminoacyl-tRNA synthetase-associated domain | Domain | |
IPR004369 | Prolyl-tRNA editing protein, YbaK/EbsC | Family | |
IPR036754 | YbaK/aminoacyl-tRNA synthetase-associated domain superfamily | Homologous Superfamily |