1EB1

Complex structure of human thrombin with N-methyl-arginine inhibitor

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
B [auth H]d1eb1.1 All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases Thrombin (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
C [auth L]d1eb1.1 All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases Thrombin (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth H]SCOP2B SuperfamilyTrypsin-like serine proteases 8042154 3000114 SCOP2B (2022-06-29)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth H]2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth H]PF00089Trypsin (Trypsin)TrypsinDomain
C [auth L]PF09396Thrombin light chain (Thrombin_light)Thrombin light chainThrombin is an enzyme that cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII. Prothrombin is activated on the surface of a phospholipid membrane where factor Xa removes the activation peptide and cleave ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
PEPTIDE INHIBITOR---
B [auth H]THROMBIN HEAVY CHAIN
C [auth L]THROMBIN LIGHT CHAIN
D [auth B]3-CYCLOHEXYL-D-ALANYL-L-PROLYL-N~2~-METHYL-L-ARGININE---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth H]IPR018992Thrombin light chainDomain
B [auth H]IPR037111Thrombin light chain domain superfamilyHomologous Superfamily
B [auth H]IPR003966Prothrombin/thrombinFamily
B [auth H]IPR018114Serine proteases, trypsin family, histidine active siteActive Site
B [auth H]IPR009003Peptidase S1, PA clanHomologous Superfamily
B [auth H]IPR033116Serine proteases, trypsin family, serine active siteActive Site
B [auth H]IPR001254Serine proteases, trypsin domainDomain
B [auth H]IPR035972Gamma-carboxyglutamic acid-rich (GLA) domain superfamilyHomologous Superfamily
B [auth H]IPR000001KringleDomain
B [auth H]IPR000294Gamma-carboxyglutamic acid-rich (GLA) domainDomain
B [auth H]IPR051659Serine Protease S1 Domain-Containing ProteinFamily
B [auth H]IPR018056Kringle, conserved siteConserved Site
B [auth H]IPR013806Kringle-like foldHomologous Superfamily
B [auth H]IPR038178Kringle superfamilyHomologous Superfamily
B [auth H]IPR001314Peptidase S1A, chymotrypsin familyFamily
B [auth H]IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
C [auth L]IPR018992Thrombin light chainDomain
C [auth L]IPR037111Thrombin light chain domain superfamilyHomologous Superfamily
C [auth L]IPR003966Prothrombin/thrombinFamily
C [auth L]IPR018114Serine proteases, trypsin family, histidine active siteActive Site
C [auth L]IPR009003Peptidase S1, PA clanHomologous Superfamily
C [auth L]IPR033116Serine proteases, trypsin family, serine active siteActive Site
C [auth L]IPR001254Serine proteases, trypsin domainDomain
C [auth L]IPR035972Gamma-carboxyglutamic acid-rich (GLA) domain superfamilyHomologous Superfamily
C [auth L]IPR000001KringleDomain
C [auth L]IPR000294Gamma-carboxyglutamic acid-rich (GLA) domainDomain
C [auth L]IPR051659Serine Protease S1 Domain-Containing ProteinFamily
C [auth L]IPR018056Kringle, conserved siteConserved Site
C [auth L]IPR013806Kringle-like foldHomologous Superfamily
C [auth L]IPR038178Kringle superfamilyHomologous Superfamily
C [auth L]IPR001314Peptidase S1A, chymotrypsin familyFamily
C [auth L]IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth H]Pharos:  P00734
C [auth L]Pharos:  P00734