1J4T | pdb_00001j4t

Structure of Artocarpin: a Lectin with Mannose Specificity (Form 2)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1j4ta_	All beta proteins	beta-Prism I	Mannose-binding lectins	Mannose-binding lectins	Artocarpin	(Artocarpus integer ) [TaxId: 3490 ],	SCOPe (2.08)
B	d1j4tb_	All beta proteins	beta-Prism I	Mannose-binding lectins	Mannose-binding lectins	Artocarpin	(Artocarpus integer ) [TaxId: 3490 ],	SCOPe (2.08)
C	d1j4tc_	All beta proteins	beta-Prism I	Mannose-binding lectins	Mannose-binding lectins	Artocarpin	(Artocarpus integer ) [TaxId: 3490 ],	SCOPe (2.08)
D	d1j4td_	All beta proteins	beta-Prism I	Mannose-binding lectins	Mannose-binding lectins	Artocarpin	(Artocarpus integer ) [TaxId: 3490 ],	SCOPe (2.08)
E	d1j4te_	All beta proteins	beta-Prism I	Mannose-binding lectins	Mannose-binding lectins	Artocarpin	(Artocarpus integer ) [TaxId: 3490 ],	SCOPe (2.08)
H	d1j4th_	All beta proteins	beta-Prism I	Mannose-binding lectins	Mannose-binding lectins	Artocarpin	(Artocarpus integer ) [TaxId: 3490 ],	SCOPe (2.08)
G	d1j4tg_	All beta proteins	beta-Prism I	Mannose-binding lectins	Mannose-binding lectins	Artocarpin	(Artocarpus integer ) [TaxId: 3490 ],	SCOPe (2.08)
F	d1j4tf_	All beta proteins	beta-Prism I	Mannose-binding lectins	Mannose-binding lectins	Artocarpin	(Artocarpus integer ) [TaxId: 3490 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Mannose-binding lectins	8041253	3001715	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Mannose-binding lectins	8041253	3001715	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Mannose-binding lectins	8041253	3001715	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Mannose-binding lectins	8041253	3001715	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Mannose-binding lectins	8041253	3001715	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Mannose-binding lectins	8041253	3001715	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Mannose-binding lectins	8041253	3001715	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Mannose-binding lectins	8041253	3001715	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Endotoxin_M	e1j4tA1	A: alpha bundles	X: Cloacin translocation domain	H: beta-Prism I	T: beta-Prism I	F: Endotoxin_M	ECOD (develop294)
B	Endotoxin_M	e1j4tB1	A: alpha bundles	X: Cloacin translocation domain	H: beta-Prism I	T: beta-Prism I	F: Endotoxin_M	ECOD (develop294)
C	Endotoxin_M	e1j4tC1	A: alpha bundles	X: Cloacin translocation domain	H: beta-Prism I	T: beta-Prism I	F: Endotoxin_M	ECOD (develop294)
D	Endotoxin_M	e1j4tD1	A: alpha bundles	X: Cloacin translocation domain	H: beta-Prism I	T: beta-Prism I	F: Endotoxin_M	ECOD (develop294)
E	Endotoxin_M	e1j4tE1	A: alpha bundles	X: Cloacin translocation domain	H: beta-Prism I	T: beta-Prism I	F: Endotoxin_M	ECOD (develop294)
H	Endotoxin_M	e1j4tH1	A: alpha bundles	X: Cloacin translocation domain	H: beta-Prism I	T: beta-Prism I	F: Endotoxin_M	ECOD (develop294)
G	Endotoxin_M	e1j4tG1	A: alpha bundles	X: Cloacin translocation domain	H: beta-Prism I	T: beta-Prism I	F: Endotoxin_M	ECOD (develop294)
F	Endotoxin_M	e1j4tF1	A: alpha bundles	X: Cloacin translocation domain	H: beta-Prism I	T: beta-Prism I	F: Endotoxin_M	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.100.10.30	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Jacalin-like lectin domain	CATH (4.3.0)
B	2.100.10.30	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Jacalin-like lectin domain	CATH (4.3.0)
C	2.100.10.30	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Jacalin-like lectin domain	CATH (4.3.0)
D	2.100.10.30	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Jacalin-like lectin domain	CATH (4.3.0)
E	2.100.10.30	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Jacalin-like lectin domain	CATH (4.3.0)
H	2.100.10.30	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Jacalin-like lectin domain	CATH (4.3.0)
G	2.100.10.30	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Jacalin-like lectin domain	CATH (4.3.0)
F	2.100.10.30	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Jacalin-like lectin domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Artocarpin	binding D-mannose binding monosaccharide binding carbohydrate binding small molecule binding D-glucose binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036404	Jacalin-like lectin domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR033734	Jacalin-like lectin domain, plant	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR001229	Jacalin-like lectin domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.