1LCB
LACTOBACILLUS CASEI THYMIDYLATE SYNTHASE TERNARY COMPLEX WITH DTMP AND H2FOLATE
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1lcba_ | Alpha and beta proteins (a+b) | Thymidylate synthase/dCMP hydroxymethylase | Thymidylate synthase/dCMP hydroxymethylase | Thymidylate synthase/dCMP hydroxymethylase | Thymidylate synthase | (Lacticaseibacillus casei ) [TaxId: 1582 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Thymidylat_synt | e1lcbA1 | A: a+b two layers | X: Thymidylate synthase/dCMP hydroxymethylase (From Topology) | H: Thymidylate synthase/dCMP hydroxymethylase (From Topology) | T: Thymidylate synthase/dCMP hydroxymethylase | F: Thymidylat_synt | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.572.10 | Alpha Beta | 2-Layer Sandwich | Thymidylate Synthase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00303 | Thymidylate synthase (Thymidylat_synt) | Thymidylate synthase | This is a family of proteins that are flavin-dependent thymidylate synthases. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR045097 | Thymidylate synthase/dCMP hydroxymethylase | Family | |
IPR020940 | Thymidylate synthase, active site | Active Site | |
IPR036926 | Thymidylate synthase/dCMP hydroxymethylase superfamily | Homologous Superfamily | |
IPR023451 | Thymidylate synthase/dCMP hydroxymethylase domain | Domain | |
IPR000398 | Thymidylate synthase | Family |
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
Chains | Enzyme Name | Description | Catalytic Residues |
---|---|---|---|
thymidylate synthase M-CSA #31 | Thymidylate synthase (TS) is an essential enzyme for the de novo synthesis of thymidine 5'-monophosphate (dTMP) via the addition of a methyl group to 2'-deoxyuridine 5'monophosphate (dUMP) from folate. TS is a highly conserved enzyme. dTMP is a nucleotide required for DNA synthesis, and therefore, it is an important drug target, especially for anticancer and antineoplastic drugs. TS also plays a role in regulating tissue folate levels. | Defined by 6 residues: GLU:A-60TRP:A-82TYR:A-146CYS:A-198ARG:A-218ASP:A-221 | EC: 2.1.1.45 (PDB Primary Data) |