1M1Y | pdb_00001m1y

Chemical Crosslink of Nitrogenase MoFe Protein and Fe Protein


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1m1ya_ Alpha and beta proteins (a/b) Chelatase-like 'Helical backbone' metal receptor Nitrogenase iron-molybdenum protein Nitrogenase iron-molybdenum protein, alpha chain (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Cd1m1yc_ Alpha and beta proteins (a/b) Chelatase-like 'Helical backbone' metal receptor Nitrogenase iron-molybdenum protein Nitrogenase iron-molybdenum protein, alpha chain (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Id1m1yi_ Alpha and beta proteins (a/b) Chelatase-like 'Helical backbone' metal receptor Nitrogenase iron-molybdenum protein Nitrogenase iron-molybdenum protein, alpha chain (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Kd1m1yk_ Alpha and beta proteins (a/b) Chelatase-like 'Helical backbone' metal receptor Nitrogenase iron-molybdenum protein Nitrogenase iron-molybdenum protein, alpha chain (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Bd1m1yb_ Alpha and beta proteins (a/b) Chelatase-like 'Helical backbone' metal receptor Nitrogenase iron-molybdenum protein Nitrogenase iron-molybdenum protein, beta chain (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Dd1m1yd_ Alpha and beta proteins (a/b) Chelatase-like 'Helical backbone' metal receptor Nitrogenase iron-molybdenum protein Nitrogenase iron-molybdenum protein, beta chain (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Jd1m1yj_ Alpha and beta proteins (a/b) Chelatase-like 'Helical backbone' metal receptor Nitrogenase iron-molybdenum protein Nitrogenase iron-molybdenum protein, beta chain (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Ld1m1yl_ Alpha and beta proteins (a/b) Chelatase-like 'Helical backbone' metal receptor Nitrogenase iron-molybdenum protein Nitrogenase iron-molybdenum protein, beta chain (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Ed1m1ye_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like Nitrogenase iron protein (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Fd1m1yf_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like Nitrogenase iron protein (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Hd1m1yh_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like Nitrogenase iron protein (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Md1m1ym_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like Nitrogenase iron protein (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Nd1m1yn_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like Nitrogenase iron protein (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Od1m1yo_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like Nitrogenase iron protein (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Pd1m1yp_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like Nitrogenase iron protein (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)
Gd1m1yg_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like Nitrogenase iron protein (Azotobacter vinelandii ) [TaxId: 354 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyHelical backbone metal receptor 8043190 3001679 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyHelical backbone metal receptor 8043190 3001679 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyHelical backbone metal receptor 8043190 3001679 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyHelical backbone metal receptor 8043190 3001679 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyHelical backbone metal receptor 8043192 3001679 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyHelical backbone metal receptor 8043192 3001679 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyHelical backbone metal receptor 8043192 3001679 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyHelical backbone metal receptor 8043192 3001679 SCOP2B (2022-06-29)
ESCOP2B SuperfamilySimibi-like P-loop NTPases 8017762 3002018 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySimibi-like P-loop NTPases 8017762 3002018 SCOP2B (2022-06-29)
HSCOP2B SuperfamilySimibi-like P-loop NTPases 8017762 3002018 SCOP2B (2022-06-29)
MSCOP2B SuperfamilySimibi-like P-loop NTPases 8017762 3002018 SCOP2B (2022-06-29)
NSCOP2B SuperfamilySimibi-like P-loop NTPases 8017762 3002018 SCOP2B (2022-06-29)
OSCOP2B SuperfamilySimibi-like P-loop NTPases 8017762 3002018 SCOP2B (2022-06-29)
PSCOP2B SuperfamilySimibi-like P-loop NTPases 8017762 3002018 SCOP2B (2022-06-29)
GSCOP2B SuperfamilySimibi-like P-loop NTPases 8017762 3002018 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AZnuAe1m1yA1 A: a/b three-layered sandwichesX: Spectrin repeat-likeH: TIM barrelsT: TIM barrelsF: ZnuAECOD (v294.1)
CZnuAe1m1yC1 A: a/b three-layered sandwichesX: Spectrin repeat-likeH: TIM barrelsT: TIM barrelsF: ZnuAECOD (v294.1)
IZnuAe1m1yI1 A: a/b three-layered sandwichesX: Spectrin repeat-likeH: TIM barrelsT: TIM barrelsF: ZnuAECOD (v294.1)
KZnuAe1m1yK1 A: a/b three-layered sandwichesX: Spectrin repeat-likeH: TIM barrelsT: TIM barrelsF: ZnuAECOD (v294.1)
BZnuAe1m1yB1 A: a/b three-layered sandwichesX: Spectrin repeat-likeH: TIM barrelsT: TIM barrelsF: ZnuAECOD (v294.1)
DZnuAe1m1yD1 A: a/b three-layered sandwichesX: Spectrin repeat-likeH: TIM barrelsT: TIM barrelsF: ZnuAECOD (v294.1)
JZnuAe1m1yJ1 A: a/b three-layered sandwichesX: Spectrin repeat-likeH: TIM barrelsT: TIM barrelsF: ZnuAECOD (v294.1)
LZnuAe1m1yL1 A: a/b three-layered sandwichesX: Spectrin repeat-likeH: TIM barrelsT: TIM barrelsF: ZnuAECOD (v294.1)
EArsA_ATPase, AAA_31e1m1yE1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: ArsA_ATPase, AAA_31ECOD (v294.1)
FArsA_ATPase, AAA_31e1m1yF1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: ArsA_ATPase, AAA_31ECOD (v294.1)
HArsA_ATPase, AAA_31e1m1yH1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: ArsA_ATPase, AAA_31ECOD (v294.1)
MArsA_ATPase, AAA_31e1m1yM1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: ArsA_ATPase, AAA_31ECOD (v294.1)
NArsA_ATPase, AAA_31e1m1yN1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: ArsA_ATPase, AAA_31ECOD (v294.1)
OArsA_ATPase, AAA_31e1m1yO1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: ArsA_ATPase, AAA_31ECOD (v294.1)
PArsA_ATPase, AAA_31e1m1yP1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: ArsA_ATPase, AAA_31ECOD (v294.1)
GArsA_ATPase, AAA_31e1m1yG1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: ArsA_ATPase, AAA_31ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.1980 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Nitrogenase molybdenum iron protein domainCATH (4.3.0)
C3.40.50.1980 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Nitrogenase molybdenum iron protein domainCATH (4.3.0)
I3.40.50.1980 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Nitrogenase molybdenum iron protein domainCATH (4.3.0)
K3.40.50.1980 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Nitrogenase molybdenum iron protein domainCATH (4.3.0)
B3.40.50.1980 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Nitrogenase molybdenum iron protein domainCATH (4.3.0)
B1.20.89.10 Mainly Alpha Up-down Bundle Nitrogenase Molybdenum-iron Protein, subunit B domain 4CATH (4.3.0)
D3.40.50.1980 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Nitrogenase molybdenum iron protein domainCATH (4.3.0)
D1.20.89.10 Mainly Alpha Up-down Bundle Nitrogenase Molybdenum-iron Protein, subunit B domain 4CATH (4.3.0)
J3.40.50.1980 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Nitrogenase molybdenum iron protein domainCATH (4.3.0)
J1.20.89.10 Mainly Alpha Up-down Bundle Nitrogenase Molybdenum-iron Protein, subunit B domain 4CATH (4.3.0)
L3.40.50.1980 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Nitrogenase molybdenum iron protein domainCATH (4.3.0)
L1.20.89.10 Mainly Alpha Up-down Bundle Nitrogenase Molybdenum-iron Protein, subunit B domain 4CATH (4.3.0)
E3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
F3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
H3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
M3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
N3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
O3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
P3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
G3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, I, K
Nitrogenase molybdenum-iron protein alpha chain -
B, D, J, L
Nitrogenase molybdenum-iron protein beta chain
E, F, G, H, M
nitrogenase IRON protein 1 - -