1MDR
THE ROLE OF LYSINE 166 IN THE MECHANISM OF MANDELATE RACEMASE FROM PSEUDOMONAS PUTIDA: MECHANISTIC AND CRYSTALLOGRAPHIC EVIDENCE FOR STEREOSPECIFIC ALKYLATION BY (R)-ALPHA-PHENYLGLYCIDATE
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1mdra1 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Enolase C-terminal domain-like | D-glucarate dehydratase-like | Mandelate racemase | (Pseudomonas putida ) [TaxId: 303 ], | SCOPe (2.08) |
A | d1mdra2 | Alpha and beta proteins (a+b) | Enolase N-terminal domain-like | Enolase N-terminal domain-like | Enolase N-terminal domain-like | Mandelate racemase | (Pseudomonas putida ) [TaxId: 303 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | MR_MLE_N | e1mdrA1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Enolase N-terminal domain-like (From Topology) | T: Enolase N-terminal domain-like | F: MR_MLE_N | ECOD (1.6) |
A | MR_MLE_C_1 | e1mdrA2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: MR_MLE_C_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.390.10 | Alpha Beta | 2-Layer Sandwich | Enolase-like | domain 1 | CATH (4.3.0) |
A | 3.20.20.120 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Enolase-like C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02746 | Mandelate racemase / muconate lactonizing enzyme, N-terminal domain (MR_MLE_N) | Mandelate racemase / muconate lactonizing enzyme, N-terminal domain | SCOP reports fold similarity with enolase N-terminal domain. | Domain | |
PF13378 | Enolase C-terminal domain-like (MR_MLE_C) | Enolase C-terminal domain-like | This domain appears at the C-terminus of many of the proteins that carry the MR_MLE_N Pfam:PF02746 domain. EC:4.2.1.40. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013341 | Mandelate racemase/muconate lactonizing enzyme, N-terminal domain | Domain | |
IPR018110 | Mandelate racemase/muconate lactonizing enzyme, conserved site | Conserved Site | |
IPR046945 | L-rhamnonate dehydratase-like | Family | |
IPR036849 | Enolase-like, C-terminal domain superfamily | Homologous Superfamily | |
IPR029065 | Enolase C-terminal domain-like | Domain | |
IPR015654 | Mandelate racemase | Family | |
IPR013342 | Mandelate racemase/muconate lactonizing enzyme, C-terminal | Domain | |
IPR029017 | Enolase-like, N-terminal | Homologous Superfamily |