1OAQ
Free conformation Ab1 of the IgE SPE-7
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth H] | d1oaqh_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | Immunoglobulin heavy chain variable domain, VH | HOUSE MOUSE (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B [auth L] | d1oaql_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | Immunoglobulin light chain lambda variable domain, VL-lambda | HOUSE MOUSE (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth H] | V-set_8 | e1oaqH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
B [auth L] | V-set_3 | e1oaqL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A [auth H] | SPE-7 Fv, anti-2,4-dinitrophenyl (DNP) IgE antibody SPE-7 | VH | Mus musculus (house mouse) | IGHV1-72*01, IGHJ2*01 | V-DOMAIN VH | IG | FV-HEAVY_LAMBDA | IMGT (202433-0) |
B [auth L] | SPE-7 Fv, anti-2,4-dinitrophenyl (DNP) IgE antibody SPE-7 | V-LAMBDA | Mus musculus (house mouse) | IGLV1*01, IGLJ1*01 | V-DOMAIN V-LAMBDA | IG | FV-HEAVY_LAMBDA | IMGT (202433-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
A [auth H] | Heavy Chain | IGHV1 | - | - | SAbDab (2024-08-23) |
B [auth L] | Light Chain | IGLV1 | Lambda | - | SAbDab (2024-08-23) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth L] | PF07686 | Immunoglobulin V-set domain (V-set) | Immunoglobulin V-set domain | This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth H] | HEAVY CHAIN | - | - | - |
B [auth L] | LIGHT CHAIN | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth L] | IPR050150 | Immunoglobulin Variable Light Chain | Family |
B [auth L] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
B [auth L] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
B [auth L] | IPR013106 | Immunoglobulin V-set domain | Domain |
B [auth L] | IPR003599 | Immunoglobulin domain subtype | Domain |
B [auth L] | IPR007110 | Immunoglobulin-like domain | Domain |