1OIO

GafD (F17c-type) Fimbrial adhesin from Escherichia coli

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1oioa_	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	Bacterial adhesins	F17c-type adhesin	Fimbrial lectin GafD	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
B	d1oiob_	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	Bacterial adhesins	F17c-type adhesin	Fimbrial lectin GafD	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	F17c-type adhesin	8025127	4003885	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Bacterial adhesin-like	8037506	3000723	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Bacterial adhesin-like	8037506	3000723	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Fim-adh_lectin	e1oioA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Fim-adh_lectin	ECOD (1.6)
B	Fim-adh_lectin	e1oioB1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Fim-adh_lectin	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.1410	Mainly Beta	Sandwich	Immunoglobulin-like	Bacterial adhesins - F17c-type	CATH (4.3.0)
B	2.60.40.1410	Mainly Beta	Sandwich	Immunoglobulin-like	Bacterial adhesins - F17c-type	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF09222	Fimbrial adhesin F17-AG, lectin domain (Fim-adh_lectin)	Fimbrial adhesin F17-AG, lectin domain	Members of this family are carbohydrate-specific lectin domains found in bacterial fimbrial adhesins. They adopt a compact, elongated structure consisting of a beta-sandwich with two major sheets: one consisting of five long strands in mixed orientat ...	Members of this family are carbohydrate-specific lectin domains found in bacterial fimbrial adhesins. They adopt a compact, elongated structure consisting of a beta-sandwich with two major sheets: one consisting of five long strands in mixed orientations, and a front sheet with four antiparallel strands, forming an immunoglobin-like fold [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	FIMBRIAL LECTIN	binding carbohydrate binding	biological process involved in interspecies interaction between organisms adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction cell adhesion involved in biofilm formation cell aggregation biofilm formation biological process involved in intraspecies interaction between organisms cell-substrate adhesion single-species biofilm formation aggregation of unicellular organisms submerged biofilm formation cell adhesion involved in single-species biofilm formation cell adhesion biological process involved in interspecies interaction between organisms adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction cell adhesion involved in biofilm formation cell aggregation biofilm formation biological process involved in intraspecies interaction between organisms cell-substrate adhesion single-species biofilm formation aggregation of unicellular organisms submerged biofilm formation cell adhesion involved in single-species biofilm formation cell adhesion cellular process single-species submerged biofilm formation	pilus cell projection cellular anatomical structure

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR000259	Fimbrial-type adhesion domain	Domain
A, B	IPR036937	Fimbrial-type adhesion domain superfamily	Homologous Superfamily
A, B	IPR015303	Fimbrial adhesin F17-AG, lectin domain	Domain
A, B	IPR050263	Bacterial Fimbrial Adherence	Family
A, B	IPR008966	Adhesion domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.