1OVN | pdb_00001ovn

Crystal Structure and Functional Analysis of Drosophila Wind-- a PDI-Related Protein

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1ovna1	All alpha proteins	ERP29 C domain-like	ERP29 C domain-like	ERP29 C domain-like	Windbeutel, C-terminal domain	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)
A	d1ovna2	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	ERP29 N domain-like	Windbeutel, N-terminal domain	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)
B	d1ovnb1	All alpha proteins	ERP29 C domain-like	ERP29 C domain-like	ERP29 C domain-like	Windbeutel, C-terminal domain	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)
B	d1ovnb2	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	ERP29 N domain-like	Windbeutel, N-terminal domain	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	ERP29 C domain-like	8039038	3000722	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Thioredoxin-like	8039040	3000031	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	ERP29 C domain-like	8039038	3000722	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Thioredoxin-like	8039040	3000031	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	GatB_Yqey	e1ovnA1	A: alpha bundles	X: EGF-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: GatB_Yqey	ECOD (develop294)
A	ECH_1	e1ovnA2	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: ECH_1	ECOD (develop294)
B	GatB_Yqey	e1ovnB1	A: alpha bundles	X: EGF-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: GatB_Yqey	ECOD (develop294)
B	ECH_1	e1ovnB2	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: ECH_1	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
A	1.20.1150.12	Mainly Alpha	Up-down Bundle	Endoplasmic reticulum protein erp29	Endoplasmic reticulum resident protein 29, C-terminal domain	CATH (4.3.0)
B	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
B	1.20.1150.12	Mainly Alpha	Up-down Bundle	Endoplasmic reticulum protein erp29	Endoplasmic reticulum resident protein 29, C-terminal domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF07749	Endoplasmic reticulum protein ERp29, C-terminal domain (ERp29)	Endoplasmic reticulum protein ERp29, C-terminal domain	ERp29 is a ubiquitously expressed endoplasmic reticulum protein found in mammals. ERp29 is comprised of two domains. This domain, the C-terminal domain, has an all helical fold [1]. ERp29 is thought to form part of the thyroglobulin folding complex ...	ERp29 is a ubiquitously expressed endoplasmic reticulum protein found in mammals. ERp29 is comprised of two domains. This domain, the C-terminal domain, has an all helical fold [1]. ERp29 is thought to form part of the thyroglobulin folding complex [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Windbeutel	identical protein binding protein binding binding protein homodimerization activity protein dimerization activity	developmental process multicellular organism development multicellular organismal process dorsal/ventral pattern formation dorsal/ventral axis specification anatomical structure development pattern specification process axis specification regionalization establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell developmental process multicellular organism development multicellular organismal process dorsal/ventral pattern formation dorsal/ventral axis specification anatomical structure development pattern specification process axis specification regionalization establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process intracellular protein localization oocyte dorsal/ventral axis specification sexual reproduction cellular developmental process reproductive process cell development cellular process involved in reproduction in multicellular organism developmental process involved in reproduction female gamete generation gamete generation oocyte development cell differentiation cell maturation oocyte axis specification oocyte construction maternal specification of dorsal/ventral axis, oocyte, soma encoded multicellular organismal reproductive process oogenesis developmental maturation anatomical structure maturation germ cell development oocyte differentiation primary metabolic process gene expression macromolecule biosynthetic process protein maturation protein folding biosynthetic process metabolic process protein metabolic process macromolecule metabolic process protein folding in endoplasmic reticulum embryo development ending in birth or egg hatching embryo development regulation of multicellular organism growth regulation of biological process regulation of growth regulation of developmental growth regulation of developmental process developmental growth growth biological regulation multicellular organism growth regulation of multicellular organismal process	cellular anatomical structure endomembrane system membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen endoplasmic reticulum lumen intracellular organelle organelle lumen organelle endoplasmic reticulum cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR016855	Endoplasmic reticulum resident protein 29	Family
A, B	IPR012883	ERp29, N-terminal	Domain
A, B	IPR011679	Endoplasmic reticulum resident protein 29, C-terminal	Domain
A, B	IPR036356	Endoplasmic reticulum resident protein 29, C-terminal domain superfamily	Homologous Superfamily
A, B	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.