1Q2L
Crystal Structure of pitrilysin
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1q2la1 | Alpha and beta proteins (a+b) | LuxS/MPP-like metallohydrolase | LuxS/MPP-like metallohydrolase | MPP-like | Protease III | (Escherichia coli str. K-12 substr. W3110 ) [TaxId: 316407 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | MPP-like | 8019919 | 4002871 | SCOP2 (2022-06-29) |
A | SCOP2 Family | MPP-like | 8019921 | 4002871 | SCOP2 (2022-06-29) |
A | SCOP2 Family | MPP-like | 8019922 | 4002871 | SCOP2 (2022-06-29) |
A | SCOP2 Family | MPP-like | 8019923 | 4002871 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | LuxS/MPP-like metallohydrolase | 8032299 | 3001831 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | LuxS/MPP-like metallohydrolase | 8032301 | 3001831 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | LuxS/MPP-like metallohydrolase | 8032302 | 3001831 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | LuxS/MPP-like metallohydrolase | 8032303 | 3001831 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Peptidase_M16_M_C | e1q2lA1 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16_M_C | ECOD (1.6) |
A | Peptidase_M16_M_N | e1q2lA3 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16_M_N | ECOD (1.6) |
A | Peptidase_M16_C_2 | e1q2lA2 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16_C_2 | ECOD (1.6) |
A | Peptidase_M16 | e1q2lA4 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.830.10 | Alpha Beta | 2-Layer Sandwich | Cytochrome Bc1 Complex | Chain A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05193 | Peptidase M16 inactive domain (Peptidase_M16_C) | Peptidase M16 inactive domain | Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. | Domain | |
PF16187 | Middle or third domain of peptidase_M16 (Peptidase_M16_M) | Middle or third domain of peptidase_M16 | - | Family | |
PF00675 | Insulinase (Peptidase family M16) (Peptidase_M16) | Insulinase (Peptidase family M16) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Protease III |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007863 | Peptidase M16, C-terminal | Domain | |
IPR011765 | Peptidase M16, N-terminal | Domain | |
IPR011249 | Metalloenzyme, LuxS/M16 peptidase-like | Homologous Superfamily | |
IPR050626 | Peptidase M16 | Family | |
IPR032632 | Peptidase M16, middle/third domain | Domain | |
IPR054734 | Coenzyme PQQ synthesis protein F-like, C-terminal lobe, domain 4 | Domain | |
IPR001431 | Peptidase M16, zinc-binding site | Binding Site |