1SR8 | pdb_00001sr8

Structural Genomics, 1.9A crystal structure of cobalamin biosynthesis protein (cbiD) from Archaeoglobus fulgidus


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1sr8a_ Multi-domain proteins (alpha and beta) CbiD-like CbiD-like CbiD-like Cobalamin biosynthesis protein CbiD (Archaeoglobus fulgidus DSM 4304 ) [TaxId: 224325 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyCbiD-like 8027357 4002972 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCbiD-like 8039736 3001960 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACbiDe1sr8A2 A: a+b two layersX: Ribosomal protein S5 domain 2-likeH: Ribosomal protein S5 domain 2-likeT: Ribosomal protein S5 domain 2-likeF: CbiDECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.1990.10 Alpha Beta 2-Layer Sandwich CbiD-like CbiD-likeCATH (4.3.0)
A3.30.2110.10 Alpha Beta 2-Layer Sandwich CbiD-like CbiD-likeCATH (4.3.0)
A3.40.50.10720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CbiD-like domainsCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01888CbiD (CbiD)CbiD- Family

InterPro: Protein Family Classification InterPro Database Homepage