1TRO
CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTION
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth A] | d1troa_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | TrpR-like | Trp repressor, TrpR | Trp repressor, TrpR | (Escherichia coli str. K-12 substr. W3110 ) [TaxId: 316407 ], | SCOPe (2.08) |
G [auth E] | d1troe_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | TrpR-like | Trp repressor, TrpR | Trp repressor, TrpR | (Escherichia coli str. K-12 substr. W3110 ) [TaxId: 316407 ], | SCOPe (2.08) |
F [auth C] | d1troc_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | TrpR-like | Trp repressor, TrpR | Trp repressor, TrpR | (Escherichia coli str. K-12 substr. W3110 ) [TaxId: 316407 ], | SCOPe (2.08) |
H [auth G] | d1trog_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | TrpR-like | Trp repressor, TrpR | Trp repressor, TrpR | (Escherichia coli str. K-12 substr. W3110 ) [TaxId: 316407 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E [auth A] | SCOP2B Superfamily | TrpR-like | 8038304 | 3001097 | SCOP2B (2022-06-29) |
G [auth E] | SCOP2B Superfamily | TrpR-like | 8038304 | 3001097 | SCOP2B (2022-06-29) |
F [auth C] | SCOP2B Superfamily | TrpR-like | 8038304 | 3001097 | SCOP2B (2022-06-29) |
H [auth G] | SCOP2B Superfamily | TrpR-like | 8038304 | 3001097 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth A] | Trp_repressor | e1troA1 | A: alpha arrays | X: HTH | H: HTH | T: TrpR | F: Trp_repressor | ECOD (1.6) |
G [auth E] | Trp_repressor | e1troE1 | A: alpha arrays | X: HTH | H: HTH | T: TrpR | F: Trp_repressor | ECOD (1.6) |
F [auth C] | Trp_repressor | e1troC1 | A: alpha arrays | X: HTH | H: HTH | T: TrpR | F: Trp_repressor | ECOD (1.6) |
H [auth G] | Trp_repressor | e1troG1 | A: alpha arrays | X: HTH | H: HTH | T: TrpR | F: Trp_repressor | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
E [auth A] | 1.10.1270.10 | Mainly Alpha | Orthogonal Bundle | Trp Operon Repressor | Chain A | CATH (4.3.0) |
G [auth E] | 1.10.1270.10 | Mainly Alpha | Orthogonal Bundle | Trp Operon Repressor | Chain A | CATH (4.3.0) |
F [auth C] | 1.10.1270.10 | Mainly Alpha | Orthogonal Bundle | Trp Operon Repressor | Chain A | CATH (4.3.0) |
H [auth G] | 1.10.1270.10 | Mainly Alpha | Orthogonal Bundle | Trp Operon Repressor | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
E [auth A], F [auth C], G [auth E], H [auth G] | PF01371 | Trp repressor protein (Trp_repressor) | Trp repressor protein | This protein binds to tryptophan and represses transcription of the Trp operon. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
E [auth A], F [auth C], G [auth E], H [auth G] | IPR038116 | TrpR-like superfamily | Homologous Superfamily |
E [auth A], F [auth C], G [auth E], H [auth G] | IPR000831 | Trp repressor | Family |
E [auth A], F [auth C], G [auth E], H [auth G] | IPR013335 | Trp repressor, bacterial | Family |
E [auth A], F [auth C], G [auth E], H [auth G] | IPR010921 | Trp repressor/replication initiator | Homologous Superfamily |