Annotations: 1VQR

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d1vqrd_	All alpha proteins	HD-domain/PDEase-like	HD-domain/PDEase-like	modified HD domain	Hypothetical protein Cj0248	(Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 ) [TaxId: 192222 ],	SCOPe (2.08)
C	d1vqrc_	All alpha proteins	HD-domain/PDEase-like	HD-domain/PDEase-like	modified HD domain	Hypothetical protein Cj0248	(Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 ) [TaxId: 192222 ],	SCOPe (2.08)
B	d1vqrb_	All alpha proteins	HD-domain/PDEase-like	HD-domain/PDEase-like	modified HD domain	Hypothetical protein Cj0248	(Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 ) [TaxId: 192222 ],	SCOPe (2.08)
A	d1vqra1	All alpha proteins	HD-domain/PDEase-like	HD-domain/PDEase-like	modified HD domain	Hypothetical protein Cj0248	(Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 ) [TaxId: 192222 ],	SCOPe (2.08)
A	d1vqra2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 ) [TaxId: 192222 ],	SCOPe (2.08)

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	HD-domain/PDEase-like	8043173	3000943	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	HD-domain/PDEase-like	8043173	3000943	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	HD-domain/PDEase-like	8043173	3000943	SCOP2B (2022-06-29)
A	SCOP2 Family	Modified HD domain	8030794	4003049	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	HD-domain/PDEase-like	8043173	3000943	SCOP2 (2022-06-29)

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	PolyA_pol_RNAbd	e1vqrD1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: PolyA_pol_RNAbd	ECOD (v294.1)
C	PolyA_pol_RNAbd	e1vqrC1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: PolyA_pol_RNAbd	ECOD (v294.1)
B	PolyA_pol_RNAbd	e1vqrB1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: PolyA_pol_RNAbd	ECOD (v294.1)
A	HDOD	e1vqrA1	A: a+b two layers	X: PDEase-like	H: HD-domain/PDEase-like	T: HD-domain/PDEase-like	F: HDOD	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	1.10.3210.10	Mainly Alpha	Orthogonal Bundle	Hypothetical protein af1432	Hypothetical protein af1432	CATH (4.3.0)
C	1.10.3210.10	Mainly Alpha	Orthogonal Bundle	Hypothetical protein af1432	Hypothetical protein af1432	CATH (4.3.0)
B	1.10.3210.10	Mainly Alpha	Orthogonal Bundle	Hypothetical protein af1432	Hypothetical protein af1432	CATH (4.3.0)
A	1.10.3210.10	Mainly Alpha	Orthogonal Bundle	Hypothetical protein af1432	Hypothetical protein af1432	CATH (4.3.0)

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF08668	HDOD domain (HDOD)	HDOD domain		Domain

Chains	Accession	Name	Type
A, B, C, D	IPR052340	RNase_Y/CdgJ	Unknown
A, B, C, D	IPR013976	Cyclic di-GMP phosphodiesterase CdgJ, HDOD domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

1VQR | pdb_00001vqr