1XSS | pdb_00001xss

Semi-rational engineering of a green-emitting coral fluorescent protein into an efficient highlighter.

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd1xssb_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches (Dipsastraea favus ) [TaxId: 1869259 ], SCOPe (2.08)
Ad1xssa_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches (Dipsastraea favus ) [TaxId: 1869259 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2 FamilyFluorescent proteins 8081046 4001049 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyGFP-like 8081047 3000576 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyGFP-like 8081047 3000576 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be1xssB1 A: HTHX: HTHH: winged helix domainT: MATH_2F:ECOD (20:10:01)
Ae1xssA1 A: Globin-likeX: Globin-likeH: Globin-likeT: Glucosamine_isoF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)
A2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
fluorescent protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR011584Green fluorescent protein-relatedFamily
A, B
IPR009017Green fluorescent proteinHomologous Superfamily