1Z1Y | pdb_00001z1y

Crystal structure of Methylated Pvs25, an ookinete protein from Plasmodium vivax

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BEGF_CAe1z1yB3 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: EGF_CAECOD (1.6)
BPlasmod_Pvs28e1z1yB2 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: Plasmod_Pvs28ECOD (1.6)
BUNK_F_TYPEe1z1yB4 A: few secondary structure elementsX: EGF-likeH: Fibulin-4 EGF-like 1 domain (From Topology)T: Fibulin-4 EGF-like 1 domainF: UNK_F_TYPEECOD (1.6)
AEGF_CAe1z1yA3 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: EGF_CAECOD (1.6)
APlasmod_Pvs28e1z1yA2 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: Plasmod_Pvs28ECOD (1.6)
AUNK_F_TYPEe1z1yA4 A: few secondary structure elementsX: EGF-likeH: Fibulin-4 EGF-like 1 domain (From Topology)T: Fibulin-4 EGF-like 1 domainF: UNK_F_TYPEECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.90.20.10 Mainly Beta Orthogonal Prism Plasmodium vivax P25 fold Plasmodium vivax P25 domainCATH (4.2.0)
A2.90.20.10 Mainly Beta Orthogonal Prism Plasmodium vivax P25 fold Plasmodium vivax P25 domainCATH (4.2.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
ookinete surface protein Pvs25 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR001881EGF-like calcium-binding domainDomain
A, B
IPR010423Ookinete surface antigen, EGF domainDomain
A, B
IPR000742EGF-like domainDomain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
MLY Parent Component: LYS

RESID:  AA0075

PSI-MOD :  N6,N6-dimethyl-L-lysine MOD:00084