1ZNS
Crystal structure of N-ColE7/12-bp DNA/Zn complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | d1znsa_ | Alpha and beta proteins (a+b) | His-Me finger endonucleases | His-Me finger endonucleases | HNH-motif | DNase domain of colicin E7 | (Escherichia coli str. K-12 substr. W3110 ) [TaxId: 316407 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | His-Me finger endonucleases | 8043906 | 3001893 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | LHH | e1znsA1 | A: few secondary structure elements | X: His-Me finger endonucleases (From Homology) | H: His-Me finger endonucleases | T: His-Me finger endonucleases | F: LHH | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 3.90.540.10 | Alpha Beta | Alpha-Beta Complex | Colicin E7 immunity protein | Chain B, fragment: Endonuclease domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A] | PF21431 | Colicin/Pyocin-S2, DNase domain (Col-Pyo_DNase) | Colicin/Pyocin-S2, DNase domain | This entry represents the DNAse domain from colicin/pyocin bacteriocins, such as pyocin-S2 from Pseudomonas aeruginosa and colicin E7/E9 from E. coli. This domain has an alpha/beta fold containing a Zn2+ ion binding site [1-5]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth B], B [auth C] | 5'-D(*CP*GP*GP*GP*AP*TP*AP*TP*CP*CP*CP*G)-3' | - | - | - |
C [auth A] | Colicin E7 |
|
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A] | IPR024575 | Cloacin/colicin | Family |
C [auth A] | IPR024566 | Colicin, receptor domain | Domain |
C [auth A] | IPR016128 | Pyosin/cloacin translocation domain | Domain |
C [auth A] | IPR036302 | Pyosin/cloacin translocation domain superfamily | Homologous Superfamily |
C [auth A] | IPR037146 | Colicin/pyocin, DNase domain superfamily | Homologous Superfamily |
C [auth A] | IPR044925 | His-Me finger superfamily | Homologous Superfamily |
C [auth A] | IPR003615 | HNH nuclease | Domain |