RCSB PDB
Deposit
Deposit via OneDep
Prepare Files via pdb_extract
Validate Structures
PDBx/mmCIF Dictionary Resources
Other Deposition Resources
Search
Advanced Search
Sequence Similarity Search
3D Similarity Search
Chemical Similarity Search
Browse by Annotations
New Entries
Unreleased Entries
PDB Statistics
Visualize
Mol* (MolStar)
Sequence Annotations Viewer
Genome View
Analyze
Pairwise Structure Alignment
Symmetry Resources in the PDB
Structure Quality
Grouping Structures
PDB Citation MeSH Network Explorer
PDB Statistics
EPPIC Biological Assemblies
External Data and Resources
Integrated Resources
Additional Resources
Download
Coordinates and Experimental Data
Sequences
Ligands
File Download Services
Web APIs
Learn
Training Courses
Guide to PDB Data
Molecule of the Month
Educational Resources
Curricula
Browse
News
SciArt Galleries
Irving Geis
David Goodsell
About
Contact Us
About RCSB PDB
Vision and Mission
Citation, Usage, Privacy Policies, Logo
News
PDB History
PDB50
User Community
Publications
RCSB PDB Advisory Committee
Team Members
Service Status
Careers
COVID-19
Help
Contact us
255,308
Structures from the PDB archive
1,062,058
Computed Structure Models (CSM)
☰
Navigation Tabs
Structure Summary
Structure
Annotations
Experiment
Sequence
Genome
Versions
28YN
|
pdb_000028yn
Display Files
FASTA Sequence
mmCIF Format
mmCIF Format (Header)
Legacy PDB Format
Legacy PDB Format (Header)
More on PDB File Formats
Download Files
FASTA Sequence
PDBx/mmCIF Format
PDBx/mmCIF Format (gz)
BinaryCIF Format (gz)
Legacy PDB Format
Legacy PDB Format (gz)
More on PDB File Formats
PDBML/XML Format (gz)
EM Map EMD-56974 (map - gz)
PDB format-like files (tar.gz)
Validation Full (PDF - gz)
Validation (XML - gz)
Validation (CIF - gz)
Biological Assembly 1 (CIF - gz)
Data API
VgrG1 from Pseudomonas aeruginosa (PA0091)
External Resource: Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
,
B
,
C
Type VI secretion system spike protein VgrG1a
-
establishment of protein localization
transport
secretion
establishment of protein localization to extracellular region
export from cell
protein secretion
establishment of localization
protein localization to extracellular region
transmembrane transport
localization
secretion by cell
protein transmembrane transport
protein transport
protein secretion by the type VI secretion system
macromolecule localization
establishment of protein localization
transport
secretion
establishment of protein localization to extracellular region
export from cell
protein secretion
establishment of localization
protein localization to extracellular region
transmembrane transport
localization
secretion by cell
protein transmembrane transport
protein transport
protein secretion by the type VI secretion system
macromolecule localization
cellular process
intracellular protein localization
Less
cellular anatomical structure
extracellular region
type VI protein secretion system complex
protein-containing complex
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
,
B
,
C
IPR017847
Type VI secretion system, RhsGE-associated Vgr family subset
Family
A
,
B
,
C
IPR050708
Type VI secretion system VgrG/RHS
Family
A
,
B
,
C
IPR006531
Gp5/Type VI secretion system Vgr protein, OB-fold domain
Domain
A
,
B
,
C
IPR037026
Vgr protein, OB-fold domain superfamily
Homologous Superfamily
A
,
B
,
C
IPR054030
Gp5/Type VI secretion system Vgr, C-terminal trimerisation domain
Domain
A
,
B
,
C
IPR006533
Type VI secretion system, RhsGE-associated Vgr protein
Family
About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy
Support
Contact Us
Help
Website FAQ
Glossary
Service Status
RCSB PDB is hosted by
RCSB PDB is a member of
RCSB Partners
Nucleic Acid Knowledgebase
wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB